RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 UBE2Q1Q7Z7E8 422 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CAMK1DQ8IU85 385 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 PAF1Q8N7H5 531 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CCDC28BQ9BUN5 200 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CYP4F12Q9HCS2 524 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CDYLQ9Y232 598 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 GRID2O43424 1007 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 ZBTB14O43829 449 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 CSPG5O95196 566 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 PRDX6P30041 224 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 CPA2P48052 419 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 ADARP55265 1226 aaKnown RBP23.19■■□□□ 1.3
MSX2-201ENST00000239243 ATP6V0D1P61421 351 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 RAD51Q06609 339 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 PEX6Q13608 980 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 PITRM1Q5JRX3 1037 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 PSAPL1Q6NUJ1 521 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 OR2AP1Q8NGE2 309 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 L3HYPDHQ96EM0 354 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 MTIF3Q9H2K0 278 aaKnown RBP23.19■■□□□ 1.3
MSX2-201ENST00000239243 BPIFA1Q9NP55 256 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 ACSS2Q9NR19 701 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 ZMYM5Q9UJ78 669 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 SLC30A1Q9Y6M5 507 aa23.19■■□□□ 1.3
MSX2-201ENST00000239243 XYLBO75191 536 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 VPS26AO75436 327 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 HNRNPA1P09651 372 aaKnown RBP eCLIP23.18■■□□□ 1.3
MSX2-201ENST00000239243 PKMP14618 531 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 SERPINA4P29622 427 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 SNRPD1P62314 119 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 CACNG1Q06432 222 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 TEAD2Q15562 447 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 PTPRNQ16849 979 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 NKAPQ8N5F7 415 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 KDM1BQ8NB78 822 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 ISG20Q96AZ6 181 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 DERL2Q9GZP9 239 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 TDP1Q9NUW8 608 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 INTS6Q9UL03 887 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 CCL26Q9Y258 94 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 E9PBE3 544 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 KLHL41O60662 606 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 MAGEC1O60732 1142 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 KCNA5P22460 613 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 PPARGP37231 505 aaPredicted RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 PTGER3P43115 390 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 MXRA7P84157 204 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 SH2D4BQ5SQS7 431 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 CERS6Q6ZMG9 384 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 FRMD7Q6ZUT3 714 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 RAB44Q7Z6P3 723 aaPredicted RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 RBM15BQ8NDT2 890 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 PTERQ96BW5 349 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 PHF21BQ96EK2 531 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 LMLNQ96KR4 655 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 NUF2Q9BZD4 464 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 GTSE1Q9NYZ3 720 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 HS3ST2Q9Y278 367 aa23.18■■□□□ 1.3
MSX2-201ENST00000239243 OAS3Q9Y6K5 1087 aaKnown RBP23.18■■□□□ 1.3
MSX2-201ENST00000239243 A0A0J9YYE9 177 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 SLC22A2O15244 555 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 GRM6O15303 877 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 RFPL2O75678 378 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 TRBC1P01850 177 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 RHOP08100 348 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 COPAP53621 1224 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 LYSMD3Q7Z3D4 306 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 PIANPQ8IYJ0 282 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 OR6K2Q8NGY2 324 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 TCEAL4Q96EI5 215 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 ASB2Q96Q27 587 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 OR52B2Q96RD2 323 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 ZFYVE1Q9HBF4 777 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 TBC1D14Q9P2M4 693 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 FAM50BQ9Y247 325 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 CCDC189A1A4V9 331 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 GOLGA8CPA6NN73 597 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 CTPS1P17812 591 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 SP100P23497 879 aaPredicted RBP23.17■■□□□ 1.3
MSX2-201ENST00000239243 PGM1P36871 562 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 RYBPQ8N488 228 aaPredicted RBP23.17■■□□□ 1.3
MSX2-201ENST00000239243 STAG3L4Q8TBR4 150 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 BIRC8Q96P09 236 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 TUBGCP5Q96RT8 1024 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 SHCBP1LQ9BZQ2 653 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 SLC25A13Q9UJS0 675 aa23.17■■□□□ 1.3
MSX2-201ENST00000239243 LINC01553A4QN01 128 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 C5orf67F2Z3F1 127 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 DCXO43602 365 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 ESR1P03372 595 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 ALPIP09923 528 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 SRCP12931 536 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 HLA-FP30511 346 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 ADSLP30566 484 aaPredicted RBP23.16■■□□□ 1.3
MSX2-201ENST00000239243 HERVK_113P63132 956 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 XIAPP98170 497 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 SATB1Q01826 763 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 ZNF678Q5SXM1 525 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 AGAP11Q8TF27 550 aa23.16■■□□□ 1.3
MSX2-201ENST00000239243 KCNJ9Q92806 393 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms