RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Papd4Q91YI6 484 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rgs18Q99PG4 235 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ndufaf1Q9CWX2 328 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mrps33Q9D2R8 106 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Shcbp1Q9Z179 668 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ate1Q9Z2A5 516 aa22.67■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm28360A0A087WR25 190 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tgfbr3lD3YZZ2 297 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cdh1P09803 884 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rps3P62908 243 aaKnown RBP22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Stx2Q00262 289 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mtf2Q02395 593 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Brsk1Q5RJI5 778 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 IbspQ61711 324 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Stx3Q64704 289 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Lrrc8eQ66JT1 795 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Sort1Q6PHU5 825 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rbm12b1Q80YR9 836 aaKnown RBP22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Insig1Q8BGI3 259 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tgif2lx2Q8K5B9 231 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Atg10Q8R1P4 215 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mat1aQ91X83 396 aaKnown RBP22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cmtm8Q9CZR4 173 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 PodxlQ9R0M4 503 aa22.66■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Shroom3Q9QXN0 1986 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm13271B1AYH9 182 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Kpna7C0LLJ0 499 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm8257E9Q8R3 264 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm6408J3QNG1 320 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gm3402K7N5P2 326 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 DldO08749 509 aaKnown RBP22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 ComtO88587 265 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Serping1P97290 504 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Eif2ak2Q03963 515 aaKnown RBP22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Slfn4Q3UV66 602 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Fam46cQ5SSF7 391 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Itga7Q61738 1179 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Scaf4Q6PFF0 1209 aaKnown RBP22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Dyrk4Q8BI55 632 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 R3hcc1lQ8BJM3 775 aaKnown RBP22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Wdr74Q8VCG3 384 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr371Q8VGB8 312 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Zfp65Q91W94 390 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Pcdha6Q91Y14 946 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tspan11Q9D1D1 253 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Klc4Q9DBS5 619 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Ropn1Q9ESG2 212 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Clcn5Q9WVD4 746 aa22.65■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tdrd6P61407 2134 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Scgb2b21A0A087WQA9 112 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Skint11A7XV14 364 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Vmn1r88E9Q235 316 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Vmn1r76F8VQ63 324 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cyp2j12G3UXT0 502 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Olfr603L7N1Y4 312 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Gp1baO35930 734 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 E2f6O54917 272 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Igf2bp1O88477 577 aaKnown RBP22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cyr61P18406 379 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Aldh3a1P47739 453 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Trim80Q3V061 624 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Serpina3gQ5I2A0 440 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Pabpn1lQ5XFR0 273 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 StyxQ60969 223 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 AtminQ6P9S1 818 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Rmnd1Q8CI78 450 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mrpl47Q8K2Y7 252 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Lars2Q8VDC0 902 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Mlc1Q8VHK5 382 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Snrnp48Q9D361 337 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Tmem81Q9D5K1 259 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Herpud2Q9JJC9 404 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Cyp3a41aQ9JMA7 504 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Dnajb9Q9QYI6 222 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Capn7Q9R1S8 813 aa22.64■■□□□ 1.22
Scn1b-201ENSMUST00000098548 Zfp811A0A0J9YU71 552 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Gm5930D3Z257 264 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Gm20671F6TVX7 576 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Znf683I7HJS4 458 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Gm5814J3QP80 125 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Acvr1P37172 509 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Polr3bP59470 1133 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 ErgP81270 486 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 AurkaP97477 395 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Thumpd3P97770 505 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Atg16l2Q6KAU8 623 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Fam72aQ8BFZ8 149 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Lrrtm3Q8BZ81 582 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Bend5Q8C6D4 421 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Mapk8Q91Y86 384 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Cdc26Q99JP4 85 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Wdr6Q99ME2 1125 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Tex46Q9CPU3 165 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Ccdc182Q9D9C6 152 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Lat2Q9JHL0 203 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Lrrc37aB1AWG4 3215 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr1160A2AVT0 319 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Gm14459A2BI73 179 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 SelenovD3YXG1 328 aa22.63■■□□□ 1.21
Scn1b-201ENSMUST00000098548 Olfr600E9PUN7 314 aa22.63■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms