RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Zmat4Q8BZ94 229 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Zswim3Q8CFL8 695 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Thap1Q8CHW1 210 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 H2-Q4Q8HWB2 354 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Nek9Q8K1R7 984 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Plac9Q8K262 108 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Lsm14aQ8K2F8 462 aaKnown RBP7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Impg1Q8R1W8 798 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Pth2rQ91V95 546 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Pcdha5Q91Y15 934 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Mov10l1Q99MV5 1187 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Sh2d4aQ9D7V1 421 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cyp2c55Q9D816 490 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 PpihQ9D868 188 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gpr63Q9EQQ3 425 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Ralgps2Q9ERD6 590 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rad50P70388 1312 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Atp8b3Q6UQ17 1335 aa7.18□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Myh8P13542 1937 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Fbxl16A2RT62 479 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 4930444P10RikD3YUR1 185 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm10800D3Z496 220 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 NapsaO09043 419 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Slc1a4O35874 532 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cd93O89103 644 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Zfp27P10077 819 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Il13P20109 131 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Nudt1P53368 156 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm10842Q3U587 122 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Tmprss11aQ3UQ41 389 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gpatch2lQ6PE65 482 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cpeb2Q812E0 521 aaKnown RBP7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Htatsf1Q8BGC0 757 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Tspan1Q99J59 240 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Tnk1Q99ML2 666 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Fam136aQ9CR98 138 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Prr23a3Q9CWP9 254 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rnf115Q9D0C1 305 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Echdc3Q9D7J9 300 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Dazap2Q9DCP9 168 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Aff4Q9ESC8 1160 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Nectin3Q9JLB9 549 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Clcn5Q9WVD4 746 aa7.17□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Sbf2E9PXF8 1872 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm7086A0A1W2P766 342 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Itih4A6X935 942 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm20499D3Z4G5 72 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm10378F6XQQ1 160 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gm7995L7N2E4 160 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cd3dP04235 173 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Hoxd12P23812 268 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Klrb1aP27811 227 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rab20P35295 233 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Nkx1-2P42580 305 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Stmn1P54227 149 aaKnown RBP7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rps13P62301 151 aaKnown RBP7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 GclcP97494 637 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Fam109bQ14B98 259 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cyb5r4Q3TDX8 528 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Smcr8Q3UMB5 935 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Eme2Q56A04 373 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Fam189bQ5HZJ5 669 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 IspdQ5RJG7 447 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Islr2Q5RKR3 745 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rabl6Q5U3K5 725 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Hand2Q61039 217 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gdpd5Q640M6 607 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Arhgef18Q6P9R4 1021 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Ffar4Q7TMA4 361 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Olfr1211Q7TR09 311 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Supt20hQ7TT00 530 aaKnown RBP7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Klhl29Q80T74 875 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Scfd1Q8BRF7 639 aaKnown RBP7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Mpp7Q8BVD5 576 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cabs1Q8C633 391 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Samd7Q8C8Y5 445 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 C1rbQ8CFG9 706 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Lsm14bQ8CGC4 385 aaKnown RBP7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Slc47a1Q8K0H1 567 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Slc18a1Q8R090 521 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Abhd8Q8R0P8 439 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Eid1Q9DCR4 169 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Vmn1r100Q9EPS5 307 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Serpini2Q9JK88 405 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Scn3aA2ASI5 1947 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Igsf9bE9PZ19 1328 aa7.16□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Tada2bD3Z4Z0 420 aaKnown RBP7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cbx4O55187 551 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Gpld1O70362 837 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Ptx3P48759 381 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Nap1l2P51860 460 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Rps3aP97351 264 aaKnown RBP7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 VegfdP97946 358 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cdkl4Q3TZA2 342 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Prmt9Q3U3W5 846 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Lrrc30Q3UV48 300 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cnga4Q3UW12 575 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Garnl3Q3V0G7 1038 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 JrkQ60976 557 aa7.15□□□□□ -1.26
Ccdc54-201ENSMUST00000062439 Cfhr1Q61406 343 aa7.15□□□□□ -1.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms