RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Kbtbd7G5E8C2 690 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 KlO35082 1014 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Alox8O35936 677 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 P01652 108 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 GsnP13020 780 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 EsrrgP62509 458 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Naa50Q6PGB6 169 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mtmr12Q80TA6 747 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gtf2a2Q80ZM7 109 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tmem220Q8BP07 167 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Lrrc56Q8K375 552 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vmn1r191Q8K4D0 298 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Micu1Q8VCX5 477 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Isoc1Q91V64 297 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dio3Q91ZI8 304 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Stard13Q923Q2 1113 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 HnrnpabQ99020 285 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Idh3aQ9D6R2 366 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 SgshQ9EQ08 502 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 PtsQ9R1Z7 144 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ap1m2Q9WVP1 423 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gipc1Q9Z0G0 333 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mcf2A2AEU1 1111 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Olfr1200A2ATJ4 336 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Znf518bB2RRE4 1077 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Erich1E9PY43 332 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3526E9PZM0 191 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Sec22bO08547 215 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Azin1O35484 448 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Rhox6O70238 227 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Krt1P04104 637 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Hspa1bP17879 642 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gdf5P43027 495 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gdf7P43029 461 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Slc11a2P49282 568 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Timm13P62075 95 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Serpina5P70458 405 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Fam171bQ14CH0 825 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ppm1hQ3UYC0 513 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pnpla1Q3V1D5 599 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pacs2Q3V3Q7 862 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 MelkQ61846 643 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cpa4Q6P8K8 420 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Sox11Q7M6Y2 395 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Trmt2bQ8BQJ6 493 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Fmo9Q8C116 539 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mtg1Q8R2R6 326 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Akr1c13Q8VC28 323 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cyp2c70Q91W64 489 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Hdac11Q91WA3 347 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Fuca2Q99KR8 461 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Glod4Q9CPV4 298 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Acer3Q9D099 267 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Dlgap1Q9D415 992 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 CpqQ9WVJ3 470 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm45713A0A1B0GS68 446 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 PtprfA2A8L5 1898 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Supt3B0QZW4 406 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Arhgap36B1AUC7 590 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 ClockO08785 855 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Tmem131O70472 1877 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 P01669 111 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 PlaaP27612 794 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Hspa8P63017 646 aaKnown RBP9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 PrkacbP68181 351 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 CtscP97821 462 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 KrtdapQ3V2T4 102 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Col11a1Q61245 1804 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ifi47Q61635 420 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ppp1r26Q6A025 1163 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Zzz3Q6KAQ7 910 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Mib1Q80SY4 1006 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pcsk9Q80W65 694 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Itpk1Q8BYN3 419 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Kcnv1Q8BZN2 503 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pi4k2bQ8CBQ5 469 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Vps50Q8CI71 964 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Nox1Q8CIZ9 591 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 NplQ9DCJ9 320 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 KelQ9EQF2 713 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 NckipsdQ9ESJ4 714 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cldn19Q9ET38 224 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Il22bQ9JJY8 179 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Pias4Q9JM05 507 aa9.78□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Cep350E9Q309 3095 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3604A0A087WPN2 559 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Olfr671A0A1B0GSN5 317 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Ssxb6A2BI74 170 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm10406A6NAS4 205 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3373A6NAS7 205 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3252E9PUT9 216 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3002E9PW72 216 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3298E9PW80 205 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3468E9QAJ8 216 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Gm3667K7N757 205 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Irs1P35569 1233 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Traf2P39429 501 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Polr3bP59470 1133 aa9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 Uba1Q02053 1058 aaKnown RBP9.77□□□□□ -0.84
Ccdc40-202ENSMUST00000053440 UcmaQ14BU0 138 aa9.77□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms