RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Arl2Q9D0J4 184 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Snrnp48Q9D361 337 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Efcab1Q9D3N2 212 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tsc22d3Q9Z2S7 137 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r96E9PZU5 664 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dnmt3cP0DOY1 709 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Sox2P48432 319 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pim3P58750 326 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AnpepP97449 966 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Coq7P97478 217 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 RadilQ69Z89 1099 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Stard13Q923Q2 1113 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Carm1Q9WVG6 608 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Il18rapQ9Z2B1 614 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 H2afb2S4R1M3 115 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pnldc1B2RXZ1 531 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm6811E9Q3Y8 510 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dnmt3bO88509 859 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Got2P05202 430 aaKnown RBP11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 MutP16332 748 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ptger1P35375 405 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ndst2P52850 883 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Acot8P58137 320 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 LvrnQ2KHK3 559 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tnks2Q3UES3 1166 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lrrc58Q3UGP9 366 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dmc1Q61880 340 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rasgrp3Q6NZH9 691 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gin1Q8K259 518 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Klhl25Q8R2P1 589 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Il36gQ8R460 164 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Usb1Q91W78 267 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdhb6Q91XZ4 772 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 MvdQ99JF5 401 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Scd3Q99PL7 359 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmbim6Q9D2C7 237 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ttc25Q9D4B2 624 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Alg13Q9D8C3 1166 aaKnown RBP11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Q9D979 236 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tmem233D3Z1U7 110 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 FancfE9Q5Z5 343 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PigfO09101 219 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Igfbp4P47879 254 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cdh6P97326 790 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Stt3bQ3TDQ1 823 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Q3UK37 420 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Znf219Q6IQX8 726 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Q6P2K3 674 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rslcan18Q7M6X5 460 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lair1Q8BG84 263 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rd3Q8BRE0 195 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Usp43Q8BUM9 1132 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ipo13Q8K0C1 963 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr570Q8VH12 312 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gjd3Q91YD1 278 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fundc2Q9D6K8 151 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ngly1Q9JI78 651 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cntn6Q9JMB8 1028 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 HaspinQ9Z0R0 754 aa11.31□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ltn1Q6A009 1767 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Olfr675A0A1B0GSE1 317 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Zfp563B8JJZ9 448 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rpl26P61255 145 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tuba4aP68368 448 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Usp22Q5DU02 525 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Bcap31Q61335 245 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Eme1Q8BJW7 570 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dio3Q91ZI8 304 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tex13bQ99MW5 186 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cd320Q9Z1P5 260 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Lgr4A2ARI4 951 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn2r125D3Z3M1 369 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gm10479K7N6H4 105 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Dpysl2O08553 572 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Il12aP43431 215 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Anxa5P48036 319 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Adcyap1r1P70205 496 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nfatc3P97305 1075 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Myo1dQ5SYD0 1006 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Eps15l1Q60902 907 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ckmt2Q6P8J7 419 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mtmr12Q80TA6 747 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Grik4Q8BMF5 956 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Gk5Q8BX05 534 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TbccQ8VCN9 341 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Shmt2Q9CZN7 504 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mrpl17Q9D8P4 176 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Trbv4A0A075B5I2 113 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc4a11A2AJN7 862 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mthfd2P18155 350 aaKnown RBP11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 ThrbP37242 461 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 EfsQ64355 560 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyp4b1Q64462 511 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ccdc85bQ6PDY0 202 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Clec7aQ6QLQ4 244 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Naaladl1Q7M758 745 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cox18Q8VC74 331 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cant1Q8VCF1 403 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Oas1cQ924S2 362 aa11.3□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pfdn1Q9CWM4 122 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms