RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Ppp3caP63328 521 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Chrna5Q2MKA5 467 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pnpla5Q32LZ8 432 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr325Q5NCD2 326 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Sra1Q80VJ2 232 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Lrrc27Q80YS5 523 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zcchc4Q8BKW4 512 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fam131aQ8BWU3 361 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Tor1aip2Q8BYU6 502 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Hectd2Q8CDU6 774 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 LiasQ99M04 373 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 GarsQ9CZD3 729 aaKnown RBP9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Bcl2l12Q9D3J3 255 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm6509A0A0J9YUV1 481 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mrgpra2aA0A0R4J1Z0 331 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm5485A0A1D5RM98 91 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm6351K9J7D1 481 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nfatc2ipO09130 412 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 PrlP06879 226 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nudt2P56380 147 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nos3P70313 1202 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Hectd3Q3U487 861 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Q3UE31 404 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fam46cQ5SSF7 391 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Best3Q6H1V1 669 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 March4Q80TE3 409 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ap4e1Q80V94 1122 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Eif4bQ8BGD9 611 aaKnown RBP9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 D3Ertd751eQ8BGN2 192 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Leg1Q8C6C9 337 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Asb2Q8K0L0 634 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Txndc11Q8K2W3 948 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Lrrc42Q8R2U7 421 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr1353Q8VGU8 309 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Slc15a4Q91W98 574 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Sec14l2Q99J08 403 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 DhddsQ99KU1 333 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mospd2Q9CWP6 518 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fam227aQ9D3V8 625 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mpp5Q9JLB2 675 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 XkQ9QXY7 446 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm5751A2AHC8 147 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Fbrsl1E9Q9T0 1031 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Usp17ldG5E8G2 545 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Usp17lcG5E8I7 545 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pik3cdO35904 1043 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 CaskO70589 926 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Prl2c2P04095 224 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mfsd14aP70187 490 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cpne9Q1RLL3 553 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Pih1d3Q3KNI6 218 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Q3TYS2 187 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Brf2Q3UAW9 420 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm813Q3UWK9 176 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Zbtb2Q3V3W4 514 aaKnown RBP9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Tab3Q571K4 716 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Lin52Q8CD94 116 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nudt4Q8R2U6 179 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Olfr586Q8VH13 317 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 SelenosQ9BCZ4 190 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ifi44lQ9BDB7 447 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ssr2Q9CPW5 183 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ogfod2Q9CQ04 349 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mfsd10Q9D2V8 456 aaKnown RBP9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Scgb2b17S4R2V3 82 aa9.16□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cyp4a14O35728 507 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 MaptP10637 733 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Nudt1P53368 156 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 UtyP79457 1212 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Igsf9Q05BQ1 1179 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mvb12bQ6KAU4 317 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gpr150Q8BL07 427 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Bclaf1Q8K019 919 aaKnown RBP9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ahsa2Q8N9S3 331 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mrpl49Q9CQ40 166 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dnajb2Q9QYI5 324 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 UxtQ9WTZ0 157 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Scgb2b12S4R2L0 112 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Slit1Q80TR4 1531 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ercc6l2Q9JIM3 1537 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Gm35911A0A1D5RLS7 214 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Sppl2cA2A6C4 690 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cyp4a32A2A8T1 509 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 SmoktcrA2KF29 484 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Ttll3A4Q9E5 927 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 UncxO08934 530 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cdk14O35495 469 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Cyp2b19O55071 492 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 WarsP32921 481 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Rab21P35282 222 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 EpxP49290 716 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Mpp1P70290 466 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Obox3Q3UT54 335 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Trim40Q3UWA4 246 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Spata13Q5DU57 656 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Scube1Q6NZL8 1018 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Acsl5Q8JZR0 683 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Serpinb1bQ8VHP7 382 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 LsrQ99KG5 594 aa9.15□□□□□ -0.94
Ccdc47-201ENSMUST00000002043 Dgat1Q9Z2A7 498 aa9.15□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms