RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 C6orf62Q9GZU0 229 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 CLK4Q9HAZ1 481 aaKnown RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 CHMP1AQ9HD42 196 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 VPS45Q9NRW7 570 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 CACNG4Q9UBN1 327 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 MLXQ9UH92 298 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 TRHDEQ9UKU6 1024 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 PTPRZ1P23471 2315 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 HTR3EA5X5Y0 456 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 HEPACAM2A8MVW5 462 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 ZNF487B1APH4 448 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 SAT1P21673 171 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 DRD1P21728 446 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 OR1E1P30953 314 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 DGKGP49619 791 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 COPZ1P61923 177 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 SNRPD1P62314 119 aaKnown RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 HYAL1Q12794 435 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 NEDD8Q15843 81 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 ZNF423Q2M1K9 1284 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 ANKS1BQ7Z6G8 1248 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 TMEM173Q86WV6 379 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 CRIPAKQ8N1N5 446 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 SYNPOQ8N3V7 929 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 C12orf76Q8N812 135 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 FAF2Q96CS3 445 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 PGAP3Q96FM1 320 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 C1orf74Q96LT6 269 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 RTP3Q9BQQ7 232 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 FARSBQ9NSD9 589 aaKnown RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 ETNK2Q9NVF9 386 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 CACNA2D2Q9NY47 1150 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 GTSE1Q9NYZ3 720 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 CRNNQ9UBG3 495 aaPredicted RBP5.69□□□□□ -1.5
RTTN-218ENST00000640408 KLHL3Q9UH77 587 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 SNX13Q9Y5W8 968 aa5.69□□□□□ -1.5
RTTN-218ENST00000640408 C2CD4BA6NLJ0 364 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 RFPL2O75678 378 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 BMP10O95393 424 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 NADKO95544 446 aaPredicted RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 FYNP06241 537 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 LAMP2P13473 410 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TCF3P15923 654 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TGM2P21980 687 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 MIPP30301 263 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 PTP4A2Q12974 167 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TCEAL1Q15170 157 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 QPRTQ15274 297 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 PDZK1Q5T2W1 519 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 SERPINA13PQ6UXR4 307 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 MON1BQ7L1V2 547 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 SYTL1Q8IYJ3 562 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 CARNMT1Q8N4J0 409 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TAB3Q8N5C8 712 aaPredicted RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 NIPA2Q8N8Q9 360 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TSEN2Q8NCE0 465 aaKnown RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 CKAP2Q8WWK9 683 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 OSBPL11Q9BXB4 747 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 SMARCAL1Q9NZC9 954 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TET1Q8NFU7 2136 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 A0A0G2JPF8 293 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TRPC5OSA6NMA1 111 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 CENPBD1B2RD01 187 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 HNRNPCL3B7ZW38 293 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 MAP3K13O43283 966 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TRIM13O60858 407 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 B3GALNT1O75752 331 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 SEC24AO95486 1093 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 HNRNPCL4P0DMR1 293 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ACADMP11310 421 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 COMTP21964 271 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 FECHP22830 423 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 IL32P24001 234 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 GSSP48637 474 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ZNF33AQ06730 810 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 RUNX3Q13761 415 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 RFTN1Q14699 578 aaPredicted RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 HIF1AQ16665 826 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 RALGPS1Q5JS13 557 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 BROXQ5VW32 411 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 PLEKHM3Q6ZWE6 761 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TMC3Q7Z5M5 1100 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 DENND1CQ8IV53 801 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 FAM9CQ8IZT9 166 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 TPCN2Q8NHX9 752 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ELSPBP1Q96BH3 223 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ZNF570Q96NI8 536 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 EPB41L1Q9H4G0 881 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 EHD1Q9H4M9 534 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.68□□□□□ -1.5
RTTN-218ENST00000640408 WHRNQ9P202 907 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 BRWD1Q9NSI6 2320 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ILVBLA1L0T0 632 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 FAM92AA1XBS5 289 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ERI2A8K979 691 aaKnown RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 MAGEC1O60732 1142 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 ZBTB11O95625 1053 aaPredicted RBP5.68□□□□□ -1.5
RTTN-218ENST00000640408 MAGEA4P43358 317 aa5.68□□□□□ -1.5
RTTN-218ENST00000640408 VAC14Q08AM6 782 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms