RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SIRPGQ9P1W8 387 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 DNMT3LQ9UJW3 386 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 NPEPPSL1A6NEC2 478 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 CKMT2P17540 419 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 CDH5P33151 784 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 ACAP2Q15057 778 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 HECTD3Q5T447 861 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 DEFB128Q7Z7B8 93 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 OFCC1Q8IZS5 231 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 AADATQ8N5Z0 425 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 ENDOVQ8N8Q3 282 aaKnown RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 ZNF483Q8TF39 744 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 SOCS4Q8WXH5 440 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 MTERF3Q96E29 417 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 DNAJC1Q96KC8 554 aaKnown RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 TELO2Q9Y4R8 837 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 GMPPBQ9Y5P6 360 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 ZBTB11O95625 1053 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 KRT20P35900 424 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 SLC16A1P53985 500 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 WNT7BP56706 349 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 LIPEQ05469 1076 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 ARMC4Q5T2S8 1044 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 TSTD2Q5T7W7 516 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 USP50Q70EL3 339 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-210ENST00000638567 KRT84Q9NSB2 600 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 AP3M1Q9Y2T2 418 aa16.64■□□□□ 0.25
SCARB2-210ENST00000638567 H3BMM5 538 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 RPP40O75818 363 aaKnown RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 GSNP06396 782 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 GRIK3Q13003 919 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 OR52E6Q96RD3 313 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 GPR21Q99679 349 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 SMAD5Q99717 465 aaKnown RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 C2orf49Q9BVC5 232 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TMEM233B4DJY2 109 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TRIM24O15164 1050 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 PKMP14618 531 aaKnown RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 GPR15P49685 360 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 ZNF132P52740 706 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 ATN1P54259 1190 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 NOMO2Q5JPE7 1267 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 REXO4Q9GZR2 422 aaKnown RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 CACNG4Q9UBN1 327 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TRPC4Q9UBN4 977 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TMCO1Q9UM00 188 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 PDZK1P1A8MUH7 402 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 E7ESA3 106 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 NPHS1O60500 1241 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TAF10Q12962 218 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 ARMCX4Q5H9R4 360 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 CLHC1Q8NHS4 586 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 EZH1Q92800 747 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 ZFYVE19Q96K21 471 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 UROC1Q96N76 676 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 MAGEL2Q9UJ55 1249 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 H3BN98 237 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 UBXN8O00124 270 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 LRATO95237 230 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 SMPD1P17405 629 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 SERPINA4P29622 427 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 TOP3AQ13472 1001 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 AP5B1Q2VPB7 878 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 SPANXN2Q5MJ10 180 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 MBLAC2Q68D91 279 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-210ENST00000638567 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
SCARB2-210ENST00000638567 NAA20P61599 178 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 CLCQ05315 142 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 FGD3Q5JSP0 725 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 HFE2Q6ZVN8 426 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 ZNF540Q8NDQ6 660 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 PRR11Q96HE9 360 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 BTN2A3PQ96KV6 586 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 FTHL17Q9BXU8 183 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 SLC39A8Q9C0K1 460 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 PTTG2Q9NZH5 202 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 GMIPQ9P107 970 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 RBPJLQ9UBG7 517 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 GNPTGQ9UJJ9 305 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 PIP5K1BO14986 540 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 POLR2JP52435 117 aaKnown RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 C1DQ13901 141 aaKnown RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 NCF4Q15080 339 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 INO80DQ53TQ3 878 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 TRMT11Q7Z4G4 463 aaKnown RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 ZNF605Q86T29 641 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 GPR180Q86V85 440 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 CRYBG2Q8N1P7 616 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 USP29Q9HBJ7 922 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 GIMAP4Q9NUV9 329 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 SMPD3Q9NY59 655 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-210ENST00000638567 PRR23AA6NEV1 266 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 RHOQP17081 205 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 LCP2Q13094 533 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 PCLAFQ15004 111 aa16.62■□□□□ 0.25
SCARB2-210ENST00000638567 FAM151BQ6UXP7 276 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms