RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TCEA1P23193 301 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SLC7A1P30825 629 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GRK6P43250 576 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GIT2Q14161 759 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SQLEQ14534 574 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CCNYL2Q5T2Q4 361 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GPC2Q8N158 579 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF567Q8N184 647 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF540Q8NDQ6 660 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GDPD5Q8WTR4 605 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CCDC86Q9H6F5 360 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 OR14I1A6ND48 311 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 LRIG2O94898 1065 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 DHFRP00374 187 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 HMGCRP04035 888 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SLC35G6P0C7Q6 338 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CCNB1P14635 433 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PTPN4P29074 926 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GALK1P51570 392 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CLCN5P51795 746 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SLC12A3P55017 1021 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CDH4P55283 916 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 OLR1P78380 273 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PPATQ06203 517 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SP140Q13342 867 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SNTA1Q13424 505 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 IZUMO2Q6UXV1 221 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 RANBP3LQ86VV4 465 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MAB21L3Q8N8X9 362 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 LINC00116Q8NCU8 138 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 BPIFB6Q8NFQ5 453 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SETD7Q8WTS6 366 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SNX33Q8WV41 574 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CEP41Q9BYV8 373 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 ALG9Q9H6U8 611 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 NOD2Q9HC29 1040 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 BPIFA1Q9NP55 256 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 OR12D3Q9UGF7 316 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PGLSO95336 258 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 RLN2P04090 185 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF132P52740 706 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 TSPAN5P62079 268 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 VLDLRP98155 873 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PSMD5Q16401 504 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PHF19Q5T6S3 580 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MSANTD2Q6P1R3 559 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 DCLRE1AQ6PJP8 1040 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 RNF19BQ6ZMZ0 732 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 LRRC69Q6ZNQ3 347 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GPRIN3Q6ZVF9 776 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 METTL16Q86W50 562 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PLCZ1Q86YW0 608 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SLC41A1Q8IVJ1 513 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 HELQQ8TDG4 1101 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PPP1R13LQ8WUF5 828 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PMEPA1Q969W9 287 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 KIAA1143Q96AT1 154 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MPP4Q96JB8 637 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 C12orf66Q96MD2 445 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 TSPAN18Q96SJ8 248 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GAD1Q99259 594 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MCMBPQ9BTE3 642 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 KCTD5Q9NXV2 234 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MAFFQ9ULX9 164 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CEP170Q5SW79 1584 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CASKO14936 926 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 TTKP33981 857 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 KLK7P49862 253 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CDK16Q00536 496 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 TLR1Q15399 786 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PPP2R2DQ66LE6 453 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GTF2IRD2BQ6EKJ0 949 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GRHL2Q6ISB3 625 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GTF2IRD2Q86UP8 949 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CLVS1Q8IUQ0 354 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 OR2L8Q8NGY9 312 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CLHC1Q8NHS4 586 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 SNIP1Q8TAD8 396 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 IGDCC4Q8TDY8 1250 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 S100ZQ8WXG8 99 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 HERVK_113Q902F9 699 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PTCD3Q96EY7 689 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GAL3ST4Q96RP7 486 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PCBD2Q9H0N5 130 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 DNAJC28Q9NX36 388 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 HMGXB4Q9UGU5 601 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 MTF2Q9Y483 593 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CHD1O14646 1710 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 FAM205AQ6ZU69 1335 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CDC42BPAQ5VT25 1732 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 PRMT5O14744 637 aaPredicted RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 FFAR3O14843 346 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 CCL16O15467 120 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 GPR42O15529 346 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 AKAP8O43823 692 aaKnown RBP5.55□□□□□ -1.52
SCN1A-209ENST00000635750 IL33O95760 270 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 LAG3P18627 525 aa5.55□□□□□ -1.52
SCN1A-209ENST00000635750 HSD11B1P28845 292 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms