RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ALKBH1Q13686 389 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TWIST1Q15672 202 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CCNG2Q16589 344 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RUNDC3AQ59EK9 446 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF766Q5HY98 468 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 AARS2Q5JTZ9 985 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 C10orf25Q5T742 122 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM69AQ5T7M9 428 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SNX30Q5VWJ9 437 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM109BQ6ICB4 259 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 KIAA1324Q6UXG2 1013 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ATF7IPQ6VMQ6 1270 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 KYAT3Q6YP21 454 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC39A5Q6ZMH5 540 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CCDC129Q6ZRS4 1044 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ADGRG6Q86SQ4 1221 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ADGRA1Q86SQ6 560 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ADSSL1Q8N142 457 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ANKRD13CQ8N6S4 541 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 LINC01465Q8N7H1 131 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ENDOVQ8N8Q3 282 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ADPRHL1Q8NDY3 354 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TNIP2Q8NFZ5 429 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RFWD2Q8NHY2 731 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RAET1EQ8TD07 263 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PIGOQ8TEQ8 1089 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CREB3L4Q8TEY5 395 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 NSUN4Q96CB9 384 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ELP4Q96EB1 424 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RNFT2Q96EX2 444 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 C12orf42Q96LP6 360 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 GUCD1Q96NT3 240 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 MEIS3Q99687 375 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SDF4Q9BRK5 362 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 HTATIP2Q9BUP3 242 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CLPBQ9H078 707 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 LMAN2LQ9H0V9 348 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SLCO5A1Q9H2Y9 848 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 GHITMQ9H3K2 345 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SFXN1Q9H9B4 322 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 USP29Q9HBJ7 922 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 KRT84Q9NSB2 600 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 THAP1Q9NVV9 213 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 MTMR10Q9NXD2 777 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ALKBH4Q9NXW9 302 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TMOD2Q9NZR1 351 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 HMG20BQ9P0W2 317 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 VPS4AQ9UN37 437 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PA2G4Q9UQ80 394 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 FLT1P17948 1338 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PTPRSQ13332 1948 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 COL4A4P53420 1690 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 A0A087WYN8 130 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 A0A1B0GUL7 405 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NPIPB13A6NJU9 1138 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NPIPB5A8MRT5 1133 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TTC34A8MYJ7 566 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NPIPB4C9JG80 1138 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM232C9JQI7 657 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 QSOX1O00391 747 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TNFSF14O43557 240 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF500O60304 480 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TMCC2O75069 709 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 PTP4A3O75365 173 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 KAT7O95251 611 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CRYABP02511 175 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ACADMP11310 421 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 UBL4AP11441 157 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 LAMP2P13473 410 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 APEHP13798 732 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ARSAP15289 507 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ENGP17813 658 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ALOX12P18054 663 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 AVPR2P30518 371 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC8A1P32418 973 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXD13P35453 343 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 HNF1BP35680 557 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 BTDP43251 543 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 RAD52P43351 418 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 AGTR2P50052 363 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 HMGCS2P54868 508 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 EEFSECP57772 596 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 WDR5P61964 334 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 UBXN2AP68543 259 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 NUCB1Q02818 461 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 GABPAQ06546 454 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 MAMLD1Q13495 774 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 GRB14Q14449 540 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 LRRC26Q2I0M4 334 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 RNASE12Q5GAN4 147 aaKnown RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 PCID2Q5JVF3 399 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TATDN1Q6P1N9 297 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 KIRREL2Q6UWL6 708 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 Q7L0L9 218 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 CPLX4Q7Z7G2 160 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 GALNT5Q7Z7M9 940 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 SCN4BQ8IWT1 228 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 RPAP2Q8IXW5 612 aaPredicted RBP2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 ADGRF3Q8IZF5 1079 aa2.63□□□□□ -1.99
SMARCB1-208ENST00000634926 TDHQ8IZJ6 230 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms