RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	CCKBR	P32239	447 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	UGT1A5	P35504	534 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PRKCI	P41743	596 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	SSR1	P43307	286 aa	Known RBP	10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	GNPDA1	P46926	289 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PPM1F	P49593	454 aa	Predicted RBP	10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	CDH6	P55285	790 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	TPM4	P67936	248 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	SKOR1	P84550	965 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PEX6	Q13608	980 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	KRT81	Q14533	505 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	CNGA3	Q16281	694 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	DPYSL2	Q16555	572 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	KIAA1614	Q5VZ46	1190 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	RAET1G	Q6H3X3	334 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PNCK	Q6P2M8	343 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	INO80C	Q6PI98	192 aa	Predicted RBP	10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	SPRED1	Q7Z699	444 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	HEATR4	Q86WZ0	1026 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	ARFGAP1	Q8N6T3	406 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	GPR156	Q8NFN8	814 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	TMEM159	Q96B96	161 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	NUDCD1	Q96RS6	583 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	CCNL2	Q96S94	520 aa	Predicted RBP	10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	CMKLR1	Q99788	373 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	GSDMC	Q9BYG8	508 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	HAUS2	Q9NVX0	235 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	AIPL1	Q9NZN9	384 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	APPL1	Q9UKG1	709 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PCDHGC4	Q9Y5F7	938 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	PCDHGA7	Q9Y5G6	932 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247	RNF215	Q9Y6U7	377 aa		10.37	□□□□□ -0.75
UBE3A-223	ENST00000631247		A0A1W2PQM1	296 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	TTC24	A2A3L6	582 aa	Predicted RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	RHPN2P1	A8MT19	583 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	TRAFD1	O14545	582 aa	Predicted RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	NUDT21	O43809	227 aa	Known RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	NOBOX	O60393	691 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	HEXIM1	O94992	359 aa	Known RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	LIPC	P11150	499 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	SKIL	P12757	684 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	PNLIP	P16233	465 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	AMPD1	P23109	780 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	TRIM23	P36406	574 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	MMP13	P45452	471 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	ZNF165	P49910	485 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	MAPK10	P53779	464 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	EPHB1	P54762	984 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	MAX	P61244	160 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	ITK	Q08881	620 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	LY6D	Q14210	128 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	PIGH	Q14442	188 aa	Predicted RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	BOLA3	Q53S33	107 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	ARMC12	Q5T9G4	340 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	MARC1	Q5VT66	337 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	E4F1	Q66K89	784 aa	Predicted RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	KCTD16	Q68DU8	428 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	PCSK4	Q6UW60	755 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	TP53INP2	Q8IXH6	220 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	NDUFAF2	Q8N183	169 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	ZDHHC1	Q8WTX9	485 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	CSPG4P5	Q96PW8	444 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	MGME1	Q9BQP7	344 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	LGR4	Q9BXB1	951 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	NOD2	Q9HC29	1040 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	SEPT10	Q9P0V9	454 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	IP6K2	Q9UHH9	426 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	ANAPC7	Q9UJX3	599 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	PHTF1	Q9UMS5	762 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	TTLL3	Q9Y4R7	772 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247	PCDHB11	Q9Y5F2	797 aa		10.36	□□□□□ -0.75
UBE3A-223	ENST00000631247		A0A1B0GTH6	734 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	PSMD11	O00231	422 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	HTRA2	O43464	458 aa	Predicted RBP	10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	MAFK	O60675	156 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	ZIC2	O95409	532 aa	Predicted RBP	10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CPNE6	O95741	557 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CCNB1	P14635	433 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CA4	P22748	312 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	IL1R2	P27930	398 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	ETV3	P41162	512 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	TRAF2	Q12933	501 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	QPCT	Q16769	361 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	AMZ1	Q400G9	498 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	RALGPS1	Q5JS13	557 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	MANEA	Q5SRI9	462 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	TMEM164	Q5U3C3	297 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CAVIN1	Q6NZI2	390 aa	Known RBP	10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	OGFOD3	Q6PK18	319 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	DOK6	Q6PKX4	331 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	SLC30A9	Q6PML9	568 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	USP53	Q70EK8	1073 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	POLN	Q7Z5Q5	900 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	PIM3	Q86V86	326 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	PELI3	Q8N2H9	469 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	CCL4L1	Q8NHW4	92 aa		10.35	□□□□□ -0.75
UBE3A-223	ENST00000631247	SNRNP27	Q8WVK2	155 aa	Known RBP	10.35	□□□□□ -0.75

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