RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PNPLA1Q8N8W4 532 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 TMEM145Q8NBT3 493 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 DENND6BQ8NEG7 585 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 SAP25Q8TEE9 199 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 PDCD6IPQ8WUM4 868 aaKnown RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 CNDP2Q96KP4 475 aaKnown RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 ZNF830Q96NB3 372 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 LENG8Q96PV6 779 aaPredicted RBP6.44□□□□□ -1.38
TCF4-249ENST00000625716 PSKH2Q96QS6 385 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 CHP1Q99653 195 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 SCNM1Q9BWG6 230 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 KRTAP9-9Q9BYP9 154 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 KRTAP9-4Q9BYQ2 154 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NRSN2Q9GZP1 204 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 PDFQ9HBH1 243 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 SPTLC3Q9NUV7 552 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ETNK2Q9NVF9 386 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 KLHL11Q9NVR0 708 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 DNAJC28Q9NX36 388 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 GGT7Q9UJ14 662 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 INTUQ9ULD6 942 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 NENFQ9UMX5 172 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ITM2BQ9Y287 266 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 BTBD3Q9Y2F9 522 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 CFAP54Q96N23 3096 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 ADAMTS9Q9P2N4 1935 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
TCF4-249ENST00000625716 TSPAN11A1L157 253 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 LRRD1A4D1F6 860 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 POM121BA6NF01 834 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 TOR1BO14657 336 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ENC1O14682 589 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 AREL1O15033 823 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 RAD51BO15315 384 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 SPOPO43791 374 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 BUB1BO60566 1050 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 MAFKO60675 156 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 SDC3O75056 442 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 CD48P09326 243 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 C1SP09871 688 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ATXN1LP0C7T5 689 aaKnown RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 ESRRAP11474 423 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 CDK4P11802 303 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 TNNT1P13805 278 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 DRD2P14416 443 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 KDELR1P24390 212 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 HTR1BP28222 390 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 CYLC1P35663 651 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 SLC1A1P43005 524 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 MMP13P45452 471 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 HNRNPKP61978 463 aaKnown RBP eCLIP6.43□□□□□ -1.38
TCF4-249ENST00000625716 YPEL5P62699 121 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 DAB2P98082 770 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 SLC10A7Q0GE19 358 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 TBX2Q13207 712 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 PDE1CQ14123 709 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 DPYSL3Q14195 570 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 LRRC14Q15048 493 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 SHBQ15464 509 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 IFI16Q16666 785 aaKnown RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 ATP13A4Q4VNC1 1196 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 RALGPS1Q5JS13 557 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 TXNRD3NBQ6F5E7 133 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 KYAT3Q6YP21 454 aaKnown RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 GCNT7Q6ZNI0 430 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ABI3BPQ7Z7G0 1075 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 SLCO6A1Q86UG4 719 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 PARGQ86W56 976 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 TP53INP2Q8IXH6 220 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 CCDC170Q8IYT3 715 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 CCNYQ8ND76 341 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ATL2Q8NHH9 583 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 BAHD1Q8TBE0 780 aaPredicted RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 FAM71BQ8TC56 605 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 BTN2A2Q8WVV5 523 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ADAMTS14Q8WXS8 1223 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 RFFLQ8WZ73 363 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 BMFQ96LC9 184 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 NUDCD1Q96RS6 583 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ZNF670Q9BS34 389 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 PCDH12Q9NPG4 1184 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 DDX56Q9NY93 547 aaKnown RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 ATP8A1Q9Y2Q0 1164 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 NEUROG3Q9Y4Z2 214 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 DOCK4Q8N1I0 1966 aa6.43□□□□□ -1.38
TCF4-249ENST00000625716 NYNRINQ9P2P1 1898 aaKnown RBP6.43□□□□□ -1.38
TCF4-249ENST00000625716 SPTY2D1-AS1A0A0U1RR47 76 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 A8MX80 341 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 GOLGA6L6A8MZA4 724 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 MATN3O15232 486 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 FFAR2O15552 330 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 SOCS5O75159 536 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 MTA2O94776 668 aa6.42□□□□□ -1.38
TCF4-249ENST00000625716 TOP3BO95985 862 aaKnown RBP6.42□□□□□ -1.38
TCF4-249ENST00000625716 CPP00450 1065 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms