RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CD97P48960 835 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 TRPV3Q8NET8 790 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.31
SKP2-209ENST00000620197 SEPT8Q92599 483 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 EDEM1Q92611 657 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.08□□□□□ -0.31
SKP2-209ENST00000620197 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 SENP8Q96LD8 212 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 C1QTNF3Q9BXJ4 246 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 SLC38A7Q9NVC3 462 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 PIN4Q9Y237 131 aaKnown RBP13.08□□□□□ -0.31
SKP2-209ENST00000620197 NEUROG3Q9Y4Z2 214 aa13.08□□□□□ -0.31
SKP2-209ENST00000620197 OAS3Q9Y6K5 1087 aaKnown RBP13.08□□□□□ -0.31
SKP2-209ENST00000620197 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 GPIP06744 558 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 RFC2P35250 354 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 ILF2Q12905 390 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 GRIK2Q13002 908 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 TMED1Q13445 227 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 CD300LGQ6UXG3 332 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 ZNF354CQ86Y25 554 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 LRRC49Q8IUZ0 686 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 RIMKLAQ8IXN7 391 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 CLYBLQ8N0X4 340 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 RHEBL1Q8TAI7 183 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 CALML6Q8TD86 181 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 ABTB1Q969K4 478 aaPredicted RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 ASB2Q96Q27 587 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 TRIM54Q9BYV2 358 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 SLC25A51Q9H1U9 297 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 CYP4F12Q9HCS2 524 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 ARPC2O15144 300 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 PSMA3P25788 255 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 RCAN2Q14206 197 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 GRB14Q14449 540 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 GRB7Q14451 532 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 TIGD7Q6NT04 549 aaPredicted RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 PATL1Q86TB9 770 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 ATOH8Q96SQ7 321 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 C9orf16Q9BUW7 83 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 TMEM45AQ9NWC5 275 aa13.08□□□□□ -0.32
SKP2-209ENST00000620197 TDRKHQ9Y2W6 561 aaKnown RBP13.08□□□□□ -0.32
SKP2-209ENST00000620197 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 UPK1AO00322 258 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 UGT1A6P19224 532 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 TTKP33981 857 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 FOXA1P55317 472 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 RAB39AQ14964 217 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 ANKDD1AQ495B1 522 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 SETMARQ53H47 684 aaPredicted RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 XKR7Q5GH72 579 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 KRT80Q6KB66 452 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 OR13F1Q8NGS4 319 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 BPIFB1Q8TDL5 484 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 LRRC58Q96CX6 371 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 MED10Q9BTT4 135 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 BRINP2Q9C0B6 783 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 LOC285095A0A1B0GVY8 99 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 LDB2O43679 373 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 CRYBB1P53674 252 aaPredicted RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 WNT3AP56704 352 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 CRY1Q16526 586 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 TMTC4Q5T4D3 741 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 SPPL2CQ8IUH8 684 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 CPNE9Q8IYJ1 553 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 RTL3Q8N8U3 475 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 SNRNP27Q8WVK2 155 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 ZNF106Q9H2Y7 1883 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 DFFAO00273 331 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 KLK8O60259 260 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 CYP11A1P05108 521 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 PGFP49763 221 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 IRF5Q13568 498 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 SPIDRQ14159 915 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 NOMO2Q5JPE7 1267 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 PEX13Q92968 403 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 PRDM5Q9NQX1 630 aaPredicted RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 INTS10Q9NVR2 710 aaKnown RBP13.07□□□□□ -0.32
SKP2-209ENST00000620197 OAZ3Q9UMX2 235 aa13.07□□□□□ -0.32
SKP2-209ENST00000620197 A0A1B0GTL3 188 aa13.06□□□□□ -0.32
SKP2-209ENST00000620197 PPP6CO00743 305 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms