RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ZXDBP98169 803 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 PDAP1Q13442 181 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 TXNDC8Q6A555 127 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 TLDC1Q6P9B6 456 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 LINGO4Q6UY18 593 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 RIPOR1Q6ZS17 1223 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 CPXM2Q8N436 756 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 TTC30BQ8N4P2 665 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 RP9Q8TA86 221 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 SH3RF2Q8TEC5 729 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 USP13Q92995 863 aaPredicted RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 CLPTM1LQ96KA5 538 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 LENG8Q96PV6 779 aaPredicted RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 ZBP1Q9H171 429 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 GSTO2Q9H4Y5 243 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 POLR3BQ9NW08 1133 aaPredicted RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 STX18Q9P2W9 335 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 VPS51Q9UID3 782 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 VPS28Q9UK41 221 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 LSM7Q9UK45 103 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 SCN8AQ9UQD0 1980 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 PFDN6O15212 129 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 FZD6O60353 706 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 BAIAP3O94812 1187 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 JUNP05412 331 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 CTSAP10619 480 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 HNRNPLP14866 589 aaKnown RBP eCLIP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 ITGAXP20702 1163 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 PTDSS1P48651 473 aaKnown RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 INHBCP55103 352 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 HERVK_113P63132 956 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 SLC7A9P82251 487 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 RCN1Q15293 331 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 PDCD2Q16342 344 aaPredicted RBP15.7■□□□□ 0.1
NR1H3-235ENST00000616973 ZNF678Q5SXM1 525 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 HTR3DQ70Z44 454 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 CUZD1Q86UP6 607 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 CEP70Q8NHQ1 597 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 ASB2Q96Q27 587 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 BEGAINQ9BUH8 593 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 ERVK-6Q9BXR3 956 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 DERL2Q9GZP9 239 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 MEAF6Q9HAF1 191 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 TAS2R13Q9NYV9 303 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 GTSE1Q9NYZ3 720 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 LRRC42Q9Y546 428 aa15.7■□□□□ 0.1
NR1H3-235ENST00000616973 LOC100653049A0A140TA62 436 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 TMEM233B4DJY2 109 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 NDUFS3O75489 264 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 KRT34O76011 436 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CSF2RAP15509 400 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CSKP41240 450 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 RHOAP61586 193 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 AP1S1P61966 158 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 SLC34A1Q06495 639 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CUL3Q13618 768 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CDH18Q13634 790 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CMPK2Q5EBM0 449 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 MYLK4Q86YV6 388 aaPredicted RBP15.69■□□□□ 0.1
NR1H3-235ENST00000616973 MRPS31Q92665 395 aaKnown RBP15.69■□□□□ 0.1
NR1H3-235ENST00000616973 ZBED2Q9BTP6 218 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 LRRC3Q9BY71 257 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 CCDC68Q9H2F9 335 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 MED16Q9Y2X0 877 aa15.69■□□□□ 0.1
NR1H3-235ENST00000616973 UBA6A0AVT1 1052 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 CCDC189A1A4V9 331 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 STX7O15400 261 aaKnown RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 SRP72O76094 671 aaKnown RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 RHOBTB1O94844 696 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 PRSS56P0CW18 603 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 PFKLP17858 780 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ITGB8P26012 769 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 GABRR2P28476 465 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 TTPAP49638 278 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ATP6V0D1P61421 351 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ZRSR2Q15696 482 aaKnown RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 LRRC26Q2I0M4 334 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 SETMARQ53H47 684 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 UNC50Q53HI1 259 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 MPP7Q5T2T1 576 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 CHSY3Q70JA7 882 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 GAREM2Q75VX8 874 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 TMC8Q8IU68 726 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 SPNS2Q8IVW8 549 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 PELI3Q8N2H9 469 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 KCNV2Q8TDN2 545 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 PHF21BQ96EK2 531 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ZNF333Q96JL9 665 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 PPP1R36Q96LQ0 422 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ATOH8Q96SQ7 321 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 YME1L1Q96TA2 773 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 C19orf43Q9BQ61 176 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 ZBTB26Q9HCK0 441 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 MTF2Q9Y483 593 aaPredicted RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 COMMD10Q9Y6G5 202 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 OAS3Q9Y6K5 1087 aaKnown RBP15.68■□□□□ 0.1
NR1H3-235ENST00000616973 BPTFQ12830 3046 aa15.68■□□□□ 0.1
NR1H3-235ENST00000616973 LCHNA4D1U4 455 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms