RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 FSHRP23945 695 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 RGS4P49798 205 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PRAMEF14Q5SWL7 426 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 UBXN11Q5T124 520 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 STXBP5Q5T5C0 1151 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 ERAP2Q6P179 960 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 UNC5AQ6ZN44 842 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PDSS2Q86YH6 399 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 KATNAL2Q8IYT4 538 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SMYD1Q8NB12 490 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PCDH19Q8TAB3 1148 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 GPATCH1Q9BRR8 931 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 LIMD1Q9UGP4 676 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 LGALS13Q9UHV8 139 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SLC24A2Q9UI40 661 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CDH22Q9UJ99 828 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 EFR3BQ9Y2G0 817 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 BRCA2P51587 3418 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 FBP2O00757 339 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 FSCN2O14926 492 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 TM9SF1O15321 606 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 AKAP10O43572 662 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 DAB1O75553 588 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CRTAMO95727 393 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PIGRP01833 764 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SOD2P04179 222 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 KCNE1P15382 129 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CYP3A5P20815 502 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 GRIA1P42261 906 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SNRPD1P62314 119 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 GPR17Q13304 367 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 THOC7Q6I9Y2 204 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SCIMPQ6UWF3 145 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 Q6ZVU0 165 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CEP68Q76N32 757 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 MMAAQ8IVH4 418 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 MYO1HQ8N1T3 1032 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 WDTC1Q8N5D0 677 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PPP1R10Q96QC0 940 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 USP29Q9HBJ7 922 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 PCDH9Q9HC56 1237 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 TDP1Q9NUW8 608 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CACNA2D2Q9NY47 1150 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 GPSM3Q9Y4H4 160 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 COL11A1P12107 1806 aaPredicted RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 MBLAC1A4D2B0 266 aaPredicted RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 OR2AG2A6NM03 316 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CBFA2T3O75081 653 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 FAM163BP0C2L3 166 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 NR4A1P22736 598 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 WARSP23381 471 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 DGKEP52429 567 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 NR1D2Q14995 579 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 TLR1Q15399 786 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 UGP2Q16851 508 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 C9orf50Q5SZB4 431 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 CYP2R1Q6VVX0 501 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 KCNMB4Q86W47 210 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 TP53INP2Q8IXH6 220 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 RAVER1Q8IY67 606 aaKnown RBP10.85□□□□□ -0.67
FAM3A-221ENST00000612856 TMIGD2Q96BF3 282 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 GULP1Q9UBP9 304 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 SUN2Q9UH99 717 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 STYXL1Q9Y6J8 313 aa10.85□□□□□ -0.67
FAM3A-221ENST00000612856 A0A0U1RQS6 177 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 MAGEC1O60732 1142 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 KLHL2O95198 593 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 EIF2S1P05198 315 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GSTT2P0CG29 244 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GSTT2BP0CG30 244 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 MSH3P20585 1137 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CRABP2P29373 138 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GPR1P46091 355 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 FAM187BQ17R55 369 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NEPROQ6NW34 567 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 OR52K2Q8NGK3 314 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 COX4I2Q96KJ9 171 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 HAPLN3Q96S86 360 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 CHRAC1Q9NRG0 131 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 DDX28Q9NUL7 540 aaKnown RBP10.84□□□□□ -0.67
FAM3A-221ENST00000612856 A0A0A0MRY4 1105 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 J3KR12 359 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PIRO00625 290 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 TGM5O43548 720 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 LIASO43766 372 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 NDUFS2O75306 463 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ADH1CP00326 375 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 DGKGP49619 791 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 POU4F1Q01851 419 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GNA12Q03113 381 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 DLG2Q15700 870 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PTPRNQ16849 979 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 C14orf80Q86SX3 495 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 PQLC1Q8N2U9 271 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 ZNF398Q8TD17 642 aa10.84□□□□□ -0.67
FAM3A-221ENST00000612856 GAB3Q8WWW8 586 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms