RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 KLRC4O43908 158 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 ZNF217O75362 1048 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SMC2O95347 1197 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 ASS1P00966 412 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HLA-DRAP01903 254 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 LTA4HP09960 611 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 PRR35P0CG20 571 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CCDC130P13994 396 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HOXB2P14652 356 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CD58P19256 250 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 GTF2H1P32780 548 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HOXD12P35452 270 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CHKAP35790 457 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 PPP1R2P41236 205 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 MXI1P50539 228 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 NDST1P52848 882 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 TUBA4AP68366 448 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 COG7P83436 770 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 INCA1Q0VD86 236 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CETN1Q12798 172 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 STIM1Q13586 685 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 KLF9Q13886 244 aaPredicted RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 BECN1Q14457 450 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 STARD3Q14849 445 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SF3A2Q15428 464 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 ETFDHQ16134 617 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CCDC6Q16204 474 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 C19orf54Q5BKX5 351 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SPDYCQ5MJ68 293 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 LYSMD4Q5XG99 296 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 KRT39Q6A163 491 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLC36A4Q6YBV0 504 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 KRBA2Q6ZNG9 492 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CLEC20AQ6ZU45 233 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 RSRC2Q7L4I2 434 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 THNSL2Q86YJ6 484 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CHPFQ8IZ52 775 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CRYBG2Q8N1P7 616 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 GUF1Q8N442 669 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HDDC3Q8N4P3 179 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CCDC33Q8N5R6 958 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 ALLCQ8N6M5 410 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 TERB1Q8NA31 727 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 FBXL13Q8NEE6 735 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CEP76Q8TAP6 659 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 UCMAQ8WVF2 138 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HMGB4Q8WW32 186 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 GOLGA1Q92805 767 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 JAKMIP2Q96AA8 810 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CYFIP2Q96F07 1278 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 FAXDC2Q96IV6 333 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 KCNK16Q96T55 309 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HNRNPABQ99729 332 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 BBS2Q9BXC9 721 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 DCLK3Q9C098 648 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 LINC00597Q9H2U6 94 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 KCTD10Q9H3F6 313 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 SLC32A1Q9H598 525 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 FBRSL1Q9HCM7 1045 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 TMEM8AQ9HCN3 771 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 CSNK1G1Q9HCP0 422 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 TMEM9BQ9NQ34 198 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 FAM49BQ9NUQ9 324 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 DNAJC17Q9NVM6 304 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 DMAC2Q9NW81 257 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 C2orf42Q9NWW7 574 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HESX1Q9UBX0 185 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 B4GALT6Q9UBX8 382 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 HPSEQ9Y251 543 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 BTBD3Q9Y2F9 522 aa4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 TNRC6BQ9UPQ9 1833 aaKnown RBP4.34□□□□□ -1.71
RNU4-89P-201ENST00000607443 EP300Q09472 2414 aaPredicted RBP4.34□□□□□ -1.72
RNU4-89P-201ENST00000607443 ATG2BQ96BY7 2078 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 LNP1A1A4G5 178 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 TYW5A2RUC4 315 aaKnown RBP4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 DCLK1O15075 740 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 SLC16A3O15427 465 aaKnown RBP4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 PJA2O43164 708 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 PEX1O43933 1283 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 CACNG3O60359 315 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 NDUFS2O75306 463 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 TULP3O75386 442 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 KCNK5O95279 499 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 VNN1O95497 513 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 ZDHHC11BP0C7U3 371 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 TRIM49P0CI25 452 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 TRIM49CP0CI26 452 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 ACADMP11310 421 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 RARGP13631 454 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 TYRP14679 529 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 GNSP15586 552 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 NTSR1P30989 418 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 P2RY2P41231 377 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 FOLR3P41439 243 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 GCLMP48507 274 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 NOVA1P51513 510 aaKnown RBP4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 NDUFA8P51970 172 aa4.33□□□□□ -1.72
RNU4-89P-201ENST00000607443 ZNF132P52740 706 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms