RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NIPSNAP2O75323 286 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 IGHA2P01877 340 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 KLKB1P03952 638 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RBP1P09455 135 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ATXN1LP0C7T5 689 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 CES1P23141 567 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 STX1BP61266 288 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 SMAD3P84022 425 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TMED1Q13445 227 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 MED21Q13503 144 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 PARP15Q460N3 678 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TRAF7Q6Q0C0 670 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RAB44Q7Z6P3 723 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RDH11Q8TC12 318 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ACTRT2Q8TDY3 377 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 SERPINI1Q99574 410 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 GPR21Q99679 349 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 HIPK3Q9H422 1215 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 EFCAB1Q9HAE3 211 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 EML4Q9HC35 981 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 AGO1Q9UL18 857 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 NPEPPSL1A6NEC2 478 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 K7ERQ8 282 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 TBL1XO60907 577 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEC24AO95486 1093 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 VNN2O95498 520 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ALPIP09923 528 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ACADSP16219 412 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ZNF33AQ06730 810 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 C16orf89Q6UX73 402 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 NPAS4Q8IUM7 802 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 ECSITQ9BQ95 431 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RNF208Q9H0X6 261 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 UNC93B1Q9H1C4 597 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 SEPT3Q9UH03 358 aa11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 RPL26L1Q9UNX3 145 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-220ENST00000600274 A6NHS1 94 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 TRPC5OSA6NMA1 111 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 PSMD12O00232 456 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CDC7O00311 574 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 AHCYL1O43865 530 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CACNG3O60359 315 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 PRAMEF11O60813 436 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 GUCA1CO95843 209 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 MZF1P28698 734 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 FOXA1P55317 472 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CYTH1Q15438 398 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 RBBP7Q16576 425 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 SFT2D3Q587I9 215 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 LRRC73Q5JTD7 316 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CWF19L1Q69YN2 538 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 TXNDC8Q6A555 127 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 ZNF549Q6P9A3 640 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 SKA2Q8WVK7 121 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 RTKNQ9BST9 563 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 GPR63Q9BZJ6 419 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 GALPQ9UBC7 116 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 APPL1Q9UKG1 709 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 RAI2Q9Y5P3 530 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 F8W8V4 182 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 H3BMM5 538 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 GIPC1O14908 333 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CKMP06732 381 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 NELFEP18615 380 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 LEPRP48357 1165 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 AGTR2P50052 363 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 RHOAP61586 193 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 ROR2Q01974 943 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CBLBQ13191 982 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CDH18Q13634 790 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CEACAM7Q14002 265 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 OR4D1Q15615 310 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 FAM91A1Q658Y4 838 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 LHX8Q68G74 356 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 ARL14EPQ8N8R7 260 aaPredicted RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 SIDT2Q8NBJ9 832 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 ATP6V1E2Q96A05 226 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 TMEM169Q96HH4 297 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 CDK15Q96Q40 435 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 SLC22A12Q96S37 553 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 C1orf50Q9BV19 199 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.574e-8■■□□□ 13.6
ARHGEF1-220ENST00000600274 VTI1BQ9UEU0 232 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 MYO9BQ13459 2157 aa11.52□□□□□ -0.57
ARHGEF1-220ENST00000600274 C2orf81A6NN90 581 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 H7C4K7 107 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 UBFD1O14562 309 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 SLC7A4O43246 635 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 FKBP6O75344 327 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 KATNA1O75449 491 aa11.51□□□□□ -0.57
ARHGEF1-220ENST00000600274 RPP40O75818 363 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms