RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 HCAR3P49019 387 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 POLR2LP62875 67 aaKnown RBP18.9■□□□□ 0.62
FARP1-229ENST00000600190 BCL2L1Q07817 233 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 RALGDSQ12967 914 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 ARHGEF7Q14155 803 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 CA9Q16790 459 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 LIPIQ6XZB0 460 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 SFTPA2Q8IWL1 248 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 TMEM168Q9H0V1 697 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 DPEP2Q9H4A9 486 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 FGF22Q9HCT0 170 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.62
FARP1-229ENST00000600190 LRIT1Q9P2V4 623 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 APPL1Q9UKG1 709 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.9■□□□□ 0.62
FARP1-229ENST00000600190 LOXL2Q9Y4K0 774 aa18.9■□□□□ 0.62
FARP1-229ENST00000600190 DFFAO00273 331 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 NOBOXO60393 691 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 ITIH1P19827 911 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 KELP23276 732 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 SCNN1BP51168 640 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 HADHBP55084 474 aaKnown RBP18.89■□□□□ 0.61
FARP1-229ENST00000600190 CDH6P55285 790 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 KIAA1024LP59773 190 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 SRSF6Q13247 344 aaKnown RBP18.89■□□□□ 0.61
FARP1-229ENST00000600190 ACOX1Q15067 660 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 PDK2Q15119 407 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 CERCAMQ5T4B2 595 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 OGFOD3Q6PK18 319 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 USP53Q70EK8 1073 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 LGR4Q9BXB1 951 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 TSGA10Q9BZW7 698 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 SP110Q9HB58 689 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 CYP4F12Q9HCS2 524 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 RNF215Q9Y6U7 377 aa18.89■□□□□ 0.61
FARP1-229ENST00000600190 UNC13CQ8NB66 2214 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 NVLO15381 856 aaKnown RBP18.88■□□□□ 0.61
FARP1-229ENST00000600190 KRT86O43790 486 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 SLC28A2O43868 658 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 PNLIPP16233 465 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 NSUN2Q08J23 767 aaKnown RBP eCLIP18.88■□□□□ 0.61
FARP1-229ENST00000600190 DPYSL2Q16555 572 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 C14orf28Q4W4Y0 310 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 ARHGAP36Q6ZRI8 547 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 RFX8Q6ZV50 586 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 SPRED1Q7Z699 444 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 DAAM2Q86T65 1068 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 TMEM139Q8IV31 216 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 LZTR1Q8N653 840 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 ACRBPQ8NEB7 543 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 CCL4L1Q8NHW4 92 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 ECHDC3Q96DC8 303 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 PEBP4Q96S96 227 aa18.88■□□□□ 0.61
FARP1-229ENST00000600190 KCTD15Q96SI1 283 aaPredicted RBP18.88■□□□□ 0.61
FARP1-229ENST00000600190 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
FARP1-229ENST00000600190 DDX56Q9NY93 547 aaKnown RBP18.88■□□□□ 0.61
FARP1-229ENST00000600190 BTNL10A8MVZ5 291 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 TNFRSF10CO14798 259 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 PJA2O43164 708 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 HOXC4P09017 264 aaPredicted RBP18.87■□□□□ 0.61
FARP1-229ENST00000600190 LIPCP11150 499 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 TNNT1P13805 278 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 ERCC2P18074 760 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 IL1R2P27930 398 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 TRIM23P36406 574 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 MAPK10P53779 464 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 ZFP36L1Q07352 338 aaKnown RBP18.87■□□□□ 0.61
FARP1-229ENST00000600190 HLTFQ14527 1009 aaKnown RBP eCLIP18.87■□□□□ 0.61
FARP1-229ENST00000600190 PHF19Q5T6S3 580 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 AFMIDQ63HM1 303 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 PNCKQ6P2M8 343 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 DPPA4Q7L190 304 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 POLNQ7Z5Q5 900 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 ARHGAP12Q8IWW6 846 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 SGF29Q96ES7 293 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 CMKLR1Q99788 373 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 ARHGAP9Q9BRR9 750 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 WDR26Q9H7D7 661 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 SUDS3Q9H7L9 328 aaPredicted RBP18.87■□□□□ 0.61
FARP1-229ENST00000600190 SEPT10Q9P0V9 454 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 RCOR3Q9P2K3 495 aaPredicted RBP18.87■□□□□ 0.61
FARP1-229ENST00000600190 ACSL6Q9UKU0 697 aa18.87■□□□□ 0.61
FARP1-229ENST00000600190 PRAMEF33A0A0G2JMD5 474 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 TTC24A2A3L6 582 aaPredicted RBP18.86■□□□□ 0.61
FARP1-229ENST00000600190 PRAMEF10O60809 474 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 CCDC175P0C221 793 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 GM2AP17900 193 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 SERPINB6P35237 376 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 SLC25A11Q02978 314 aaKnown RBP18.86■□□□□ 0.61
FARP1-229ENST00000600190 IL10RBQ08334 325 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 RFTN1Q14699 578 aaPredicted RBP18.86■□□□□ 0.61
FARP1-229ENST00000600190 PRICKLE2Q7Z3G6 844 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 TMPRSS9Q7Z410 1059 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 SYCE1Q8N0S2 351 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 PELI3Q8N2H9 469 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 NPWQ8N729 165 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 EXD3Q8N9H8 876 aa18.86■□□□□ 0.61
FARP1-229ENST00000600190 KIAA1524Q8TCG1 905 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms