RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PGLSO95336 258 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 CPNE6O95741 557 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 FGF1P05230 155 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 ETV5P41161 510 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 NR1D2Q14995 579 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 CLPPQ16740 277 aaPredicted RBP23.89■■□□□ 1.41
LSM4-202ENST00000593564 PHF19Q5T6S3 580 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 DENND2CQ68D51 928 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 NSMCE1Q8WV22 266 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 TEKT4Q8WW24 435 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 SGF29Q96ES7 293 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 SCRN2Q96FV2 425 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 SEMA6CQ9H3T2 930 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 SUDS3Q9H7L9 328 aaPredicted RBP23.89■■□□□ 1.41
LSM4-202ENST00000593564 SEPT10Q9P0V9 454 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 TAAR2Q9P1P5 351 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 SUFUQ9UMX1 484 aa23.89■■□□□ 1.41
LSM4-202ENST00000593564 A0A1B0GTH6 734 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 RHPN2P1A8MT19 583 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 RARAP10276 462 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 SKILP12757 684 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 SERPINB6P35237 376 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 MMP13P45452 471 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 GNPDA1P46926 289 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 CDH6P55285 790 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 MAXP61244 160 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 SRSF6Q13247 344 aaKnown RBP23.88■■□□□ 1.41
LSM4-202ENST00000593564 MARC1Q5VT66 337 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 USP53Q70EK8 1073 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 PIM3Q86V86 326 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 USP7Q93009 1102 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 B3GNT4Q9C0J1 378 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 FOXJ2Q9P0K8 574 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 SLC17A4Q9Y2C5 497 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 PPIL1Q9Y3C6 166 aa23.88■■□□□ 1.41
LSM4-202ENST00000593564 C9orf172C9J069 976 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 AGRPO00253 132 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 ZW10O43264 779 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 IVLP07476 585 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 AK4P27144 223 aaPredicted RBP23.87■■□□□ 1.41
LSM4-202ENST00000593564 CD82P27701 267 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 MAPK10P53779 464 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 OR1D5P58170 312 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 DPTQ07507 201 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 PEX6Q13608 980 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 PIGHQ14442 188 aaPredicted RBP23.87■■□□□ 1.41
LSM4-202ENST00000593564 C16orf72Q14CZ0 275 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 ARMC12Q5T9G4 340 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 RAET1GQ6H3X3 334 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 Q6ZVL8 140 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 USP45Q70EL2 814 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 TSPAN33Q86UF1 283 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 PTCD2Q8WV60 388 aaKnown RBP23.87■■□□□ 1.41
LSM4-202ENST00000593564 RDH14Q9HBH5 336 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 PCDH18Q9HCL0 1135 aa23.87■■□□□ 1.41
LSM4-202ENST00000593564 AKAP7Q9P0M2 348 aaPredicted RBP23.87■■□□□ 1.41
LSM4-202ENST00000593564 GOLGA6CA6NDK9 693 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 GOLGA6BA6NDN3 693 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 ECEL1O95672 775 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 ITGB2P05107 769 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 GOLGA6DP0CG33 693 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 GPR3P46089 330 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 AMZ1Q400G9 498 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 MANEAQ5SRI9 462 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 TXNRD3NBQ6F5E7 133 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 XKR5Q6UX68 686 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 TECPR1Q7Z6L1 1165 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 ZFAND4Q86XD8 727 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 DTX1Q86Y01 620 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 LRRC49Q8IUZ0 686 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 TEX26Q8N6G2 289 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 NIPA2Q8N8Q9 360 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 PIH1D2Q8WWB5 315 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 NAP1L5Q96NT1 182 aaPredicted RBP23.86■■□□□ 1.41
LSM4-202ENST00000593564 GOLGA6AQ9NYA3 693 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 TMEM63CQ9P1W3 806 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 ST14Q9Y5Y6 855 aa23.86■■□□□ 1.41
LSM4-202ENST00000593564 HGSO14964 777 aaPredicted RBP23.85■■□□□ 1.41
LSM4-202ENST00000593564 ALDH4A1P30038 563 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 ADCY8P40145 1251 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 POLD2P49005 469 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 CTBSQ01459 385 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 SLC25A11Q02978 314 aaKnown RBP23.85■■□□□ 1.41
LSM4-202ENST00000593564 PTPRRQ15256 657 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 LINC00303Q3SY05 128 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 FIGNQ5HY92 759 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 SLC30A9Q6PML9 568 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 ZNF574Q6ZN55 896 aaPredicted RBP23.85■■□□□ 1.41
LSM4-202ENST00000593564 EXD3Q8N9H8 876 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 SCARF2Q96GP6 870 aaPredicted RBP23.85■■□□□ 1.41
LSM4-202ENST00000593564 NUDT22Q9BRQ3 303 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 RCOR3Q9P2K3 495 aaPredicted RBP23.85■■□□□ 1.41
LSM4-202ENST00000593564 PCDHB11Q9Y5F2 797 aa23.85■■□□□ 1.41
LSM4-202ENST00000593564 SPTA1P02549 2419 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.84■■□□□ 1.41
LSM4-202ENST00000593564 FZD6O60353 706 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 SOD1P00441 154 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 KRT10P13645 584 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 CTPS1P17812 591 aa23.84■■□□□ 1.41
LSM4-202ENST00000593564 CD1CP29017 333 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms