RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MTM1Q13496 603 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SNX1Q13596 522 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 ARHGEF7Q14155 803 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SPARCL1Q14515 664 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 NFATC4Q14934 902 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SIX1Q15475 284 aaPredicted RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 CCDC157Q569K6 752 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SIRPB2Q5JXA9 342 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 ANKRD20A2Q5SQ80 823 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 FAXCQ5TGI0 409 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 ANKRD20A1Q5TYW2 823 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 ANKRD20A3Q5VUR7 823 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 PNCKQ6P2M8 343 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 ENPP7Q6UWV6 458 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 MICALCLQ6ZW33 695 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 RD3Q7Z3Z2 195 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 TRIM74Q86UV6 250 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 PARGQ86W56 976 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 HID1Q8IV36 788 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 FCRL5Q96RD9 977 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 APOL2Q9BQE5 337 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 RIOK2Q9BVS4 552 aaKnown RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 GBA3Q9H227 469 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SLC32A1Q9H598 525 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 MRPL40Q9NQ50 206 aaKnown RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 TOR4AQ9NXH8 423 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 FAM153AQ9UHL3 310 aa11.51□□□□□ -0.57
VMP1-211ENST00000591315 RPL26L1Q9UNX3 145 aaKnown RBP11.51□□□□□ -0.57
VMP1-211ENST00000591315 LOC285095A0A1B0GVY8 99 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 MTSS1O43312 755 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 SIGLEC6O43699 453 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 BUD23O43709 281 aaKnown RBP11.5□□□□□ -0.57
VMP1-211ENST00000591315 NRDCO43847 1150 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 DFNA5O60443 496 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 METTL18O95568 372 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 AGTP01019 485 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 FUCA1P04066 466 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 CSF2P04141 144 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ETS1P14921 441 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 POLD2P49005 469 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 CLDN6P56747 220 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 YPEL5P62699 121 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 GSE1Q14687 1217 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 SUZ12Q15022 739 aaKnown RBP11.5□□□□□ -0.57
VMP1-211ENST00000591315 SEL1L2Q5TEA6 688 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ESRP1Q6NXG1 681 aaKnown RBP11.5□□□□□ -0.57
VMP1-211ENST00000591315 MACC1Q6ZN28 852 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ERMP1Q7Z2K6 904 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 MARCH9Q86YJ5 346 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 DCP2Q8IU60 420 aaKnown RBP11.5□□□□□ -0.57
VMP1-211ENST00000591315 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 OXR1Q8N573 874 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ZNF548Q8NEK5 533 aaPredicted RBP11.5□□□□□ -0.57
VMP1-211ENST00000591315 LMX1AQ8TE12 382 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 IFT43Q96FT9 208 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 PDXPQ96GD0 296 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 SPATA13Q96N96 652 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ALS2CR12Q96Q35 445 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 LYSMD1Q96S90 227 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 TMEM121Q9BTD3 319 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 FICDQ9BVA6 458 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 CLPBQ9H078 707 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 SMARCAL1Q9NZC9 954 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 TRHDEQ9UKU6 1024 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 ZNF711Q9Y462 761 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 IGF2RP11717 2491 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 BPTFQ12830 3046 aa11.5□□□□□ -0.57
VMP1-211ENST00000591315 SCN8AQ9UQD0 1980 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 GOLGA6L9A6NEM1 432 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 HAX1O00165 279 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 PSMD11O00231 422 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 INPP4BO15327 924 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 LIASO43766 372 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 USP12O75317 370 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 ADRB1P08588 477 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 FTH1P19P0C7X4 201 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 CA4P22748 312 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 TRIM23P36406 574 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 SPINT3P49223 89 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 SRP54P61011 504 aaKnown RBP11.49□□□□□ -0.57
VMP1-211ENST00000591315 FOXC1Q12948 553 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 PTPRCAPQ14761 206 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 OASLQ15646 514 aaKnown RBP11.49□□□□□ -0.57
VMP1-211ENST00000591315 DEFB133Q30KQ1 61 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 PRRT3Q5FWE3 981 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 ZNF569Q5MCW4 686 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 ALS2CLQ60I27 953 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 RAET1GQ6H3X3 334 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 DOK6Q6PKX4 331 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 SFTPA2Q8IWL1 248 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 NDUFAF2Q8N183 169 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 SLC35F6Q8N357 371 aa11.49□□□□□ -0.57
VMP1-211ENST00000591315 GLIS1Q8NBF1 620 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms