RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 VKORC1Q9BQB6 163 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 HEPHQ9BQS7 1158 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 DUSP16Q9BY84 665 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 TNKS2Q9H2K2 1166 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 RARRES3Q9UL19 164 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 PPT2Q9UMR5 302 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 L3MBTL1Q9Y468 752 aa6.86□□□□□ -1.31
TPM4-210ENST00000588507 USF3Q68DE3 2245 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 PRSS38A1L453 326 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 K7ERQ8 282 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 AREL1O15033 823 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 CPNE3O75131 537 aaKnown RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 ZBED1O96006 694 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 C9P02748 559 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 PCCBP05166 539 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 CD58P19256 250 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 RRM1P23921 792 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 ATICP31939 592 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 POLD2P49005 469 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 EPHA4P54764 986 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 MYL6P60660 151 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 MTM1Q13496 603 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 TRPC3Q13507 836 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 PM20D1Q6GTS8 502 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 BPHLQ86WA6 291 aaPredicted RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 UNC93AQ86WB7 457 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 CCAR2Q8N163 923 aaKnown RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 AGAP11Q8TF27 550 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 FIZ1Q96SL8 496 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 REEP2Q9BRK0 252 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 EPB41L1Q9H4G0 881 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 CARS2Q9HA77 564 aaKnown RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 ABCC13Q9NSE7 274 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
TPM4-210ENST00000588507 VPS28Q9UK41 221 aa6.85□□□□□ -1.31
TPM4-210ENST00000588507 A6NNC1 897 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 HTRA2O43464 458 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 SMAD6O43541 496 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 TLX2O43763 284 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 SHOX2O60902 331 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 ENDOD1O94919 500 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 ERBB2P04626 1255 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 CPA1P15085 419 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 GSPT1P15170 499 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 MX2P20592 715 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 CHRNB4P30926 498 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 THBS2P35442 1172 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 CLCN6P51797 869 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 TKTL1P51854 596 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 ZNF131P52739 623 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 GFERP55789 205 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 GSDMDP57764 484 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 SRSF2Q01130 221 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 AIMP2Q13155 320 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 GPS2Q13227 327 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 HDAC1Q13547 482 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 KRT32Q14532 448 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 SSPNQ14714 243 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 TSGA10IPQ3SY00 556 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 RAB41Q5JT25 222 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 TTC22Q5TAA0 569 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 TMCO4Q5TGY1 634 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 IRAK1BP1Q5VVH5 260 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 BSPRYQ5W0U4 402 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 LCN10Q6JVE6 187 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 CXorf57Q6NSI4 855 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 C22orf39Q6P5X5 142 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 SCARA5Q6ZMJ2 495 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 PLD6Q8N2A8 252 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 FBXL16Q8N461 479 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 FUBP1Q96AE4 644 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 WRAP53Q9BUR4 548 aaKnown RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 RAB34Q9BZG1 259 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 UBXN6Q9BZV1 441 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 SDCBP2Q9H190 292 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 XYLT2Q9H1B5 865 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 ST6GALNAC4Q9H4F1 302 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 ZSCAN16Q9H4T2 348 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 SUDS3Q9H7L9 328 aaPredicted RBP6.84□□□□□ -1.31
TPM4-210ENST00000588507 YAE1D1Q9NRH1 226 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 EXOC7Q9UPT5 735 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 COQ6Q9Y2Z9 468 aa6.84□□□□□ -1.31
TPM4-210ENST00000588507 HRNRQ86YZ3 2850 aaPredicted RBP6.83□□□□□ -1.32
TPM4-210ENST00000588507 TRRAPQ9Y4A5 3859 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 ABCA1O95477 2261 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 TRAV17A0A0B4J275 112 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 TRIM49BA6NDI0 452 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 ADAM10O14672 748 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 SMPD2O60906 423 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 RASSF9O75901 435 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 CLSTN1O94985 981 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 ZRANB2O95218 330 aaKnown RBP eCLIP6.83□□□□□ -1.32
TPM4-210ENST00000588507 RASAL1O95294 804 aa6.83□□□□□ -1.32
TPM4-210ENST00000588507 LTFP02788 710 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms