RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ZNF423Q2M1K9 1284 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 SOWAHCQ53LP3 525 aaPredicted RBP15.81■□□□□ 0.12
CHD3-215ENST00000572750 FAXCQ5TGI0 409 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 RFLNAQ6ZTI6 216 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 LYSMD3Q7Z3D4 306 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 PELI3Q8N2H9 469 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 SLC25A41Q8N5S1 370 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 PLA2G15Q8NCC3 412 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 COG1Q8WTW3 980 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 DTD2Q96FN9 168 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 OSBPL9Q96SU4 736 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 FICDQ9BVA6 458 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 FSD1LQ9BXM9 530 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 GPR27Q9NS67 375 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 CD84Q9UIB8 345 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 HS3ST3A1Q9Y663 406 aa15.81■□□□□ 0.12
CHD3-215ENST00000572750 NAV2Q8IVL1 2488 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 K7ESM1 405 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 PSMD11O00231 422 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 MAGEC1O60732 1142 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 CLDN7O95471 211 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 ZNF30P17039 623 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 CCT8P50990 548 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 STC1P52823 247 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 GEMP55040 296 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 FOXC1Q12948 553 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 PDE1CQ14123 709 aaPredicted RBP15.8■□□□□ 0.12
CHD3-215ENST00000572750 INPP5AQ14642 412 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 SIRPB2Q5JXA9 342 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 Q6ZVL8 140 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 PRUNE1Q86TP1 453 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 RASGEF1CQ8N431 466 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 RTP4Q96DX8 246 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 LYSMD1Q96S90 227 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 ELF4Q99607 663 aaPredicted RBP15.8■□□□□ 0.12
CHD3-215ENST00000572750 TM7SF3Q9NS93 570 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 SNX12Q9UMY4 172 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 ZNF148Q9UQR1 794 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 ZNF711Q9Y462 761 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 OR1A2Q9Y585 309 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 SPO11Q9Y5K1 396 aa15.8■□□□□ 0.12
CHD3-215ENST00000572750 A0A1B0GTQ1 180 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 LOC285095A0A1B0GVY8 99 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 GOLGA6CA6NDK9 693 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 ZNF185O15231 689 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 GCATO75600 419 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 ANXA9O76027 345 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 METTL18O95568 372 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 IFNB1P01574 187 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 GOLGA6DP0CG33 693 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
CHD3-215ENST00000572750 PTSQ03393 145 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 PRPSAP1Q14558 356 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 SHBQ15464 509 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 SLC1A5Q15758 541 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 CDKN3Q16667 212 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 KCTD19Q17RG1 926 aaPredicted RBP15.79■□□□□ 0.12
CHD3-215ENST00000572750 ESRP1Q6NXG1 681 aaKnown RBP15.79■□□□□ 0.12
CHD3-215ENST00000572750 CBARPQ8N350 705 aaPredicted RBP15.79■□□□□ 0.12
CHD3-215ENST00000572750 PRELID2Q8N945 189 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 FAM174AQ8TBP5 190 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 MAIP1Q8WWC4 291 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 PBKQ96KB5 322 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 APOL2Q9BQE5 337 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 SHOC2Q9UQ13 582 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 ZKSCAN5Q9Y2L8 839 aa15.79■□□□□ 0.12
CHD3-215ENST00000572750 PGRMC1O00264 195 aaKnown RBP15.78■□□□□ 0.12
CHD3-215ENST00000572750 FANCGO15287 622 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 SDC3O75056 442 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 USP12O75317 370 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 AGTP01019 485 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 ITGAVP06756 1048 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 ETS1P14921 441 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 EPHA8P29322 1005 aaPredicted RBP15.78■□□□□ 0.12
CHD3-215ENST00000572750 THOP1P52888 689 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 MTM1Q13496 603 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 FZD2Q14332 565 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 CCNG2Q16589 344 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 P3H1Q32P28 736 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 ZNF542PQ5EBM4 170 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 CCDC70Q6NSX1 233 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 TECPR1Q7Z6L1 1165 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 PARGQ86W56 976 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 GATAD2AQ86YP4 633 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 CCDC89Q8N998 374 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 AP1M1Q9BXS5 423 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 ERVMER34-1Q9H9K5 563 aa15.78■□□□□ 0.12
CHD3-215ENST00000572750 AAR2Q9Y312 384 aaKnown RBP15.78■□□□□ 0.12
CHD3-215ENST00000572750 ZNF106Q9H2Y7 1883 aaKnown RBP15.78■□□□□ 0.12
CHD3-215ENST00000572750 TDRD6O60522 2096 aaKnown RBP15.77■□□□□ 0.12
CHD3-215ENST00000572750 SPTY2D1-AS1A0A0U1RR47 76 aa15.77■□□□□ 0.12
CHD3-215ENST00000572750 TMEM8BA6NDV4 472 aa15.77■□□□□ 0.12
CHD3-215ENST00000572750 AURKAO14965 403 aa15.77■□□□□ 0.12
CHD3-215ENST00000572750 FGF1P05230 155 aa15.77■□□□□ 0.12
CHD3-215ENST00000572750 ZNF883P0CG24 379 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms