RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LRFN2Q9ULH4 789 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PCDHB7Q9Y5E2 793 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 PCDHGC4Q9Y5F7 938 aa8.77□□□□□ -1.01
LINC00558-201ENST00000569422 MTMR11A4FU01 709 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 CD3EAPO15446 510 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 GPR39O43194 453 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 LDB2O43679 373 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 GJB5O95377 273 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TACR2P21452 398 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 FGFR3P22607 806 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 RGRP47804 291 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ALDH1A3P47895 512 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 LEPRP48357 1165 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 CDKN1CP49918 316 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 CLCN5P51795 746 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 NDST2P52849 883 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ECT2LQ008S8 904 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 DSC1Q08554 894 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 FASTKQ14296 549 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MYBPC3Q14896 1274 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 THEMIS2Q5TEJ8 643 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 AFMIDQ63HM1 303 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 CCSAPQ6IQ19 270 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 AAGABQ6PD74 315 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 PAOXQ6QHF9 649 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SCML4Q8N228 414 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 PTGR2Q8N8N7 351 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ICA1LQ8NDH6 482 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SPPL2BQ8TCT7 592 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SH3KBP1Q96B97 665 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TRIM8Q9BZR9 551 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 STK39Q9UEW8 545 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 BTRCQ9Y297 605 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 DTNAQ9Y4J8 743 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TRAF6Q9Y4K3 522 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ZFP37Q9Y6Q3 630 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 A0A0B4J203 849 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TCAF2A6NFQ2 919 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TRPC5OSA6NMA1 111 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 FAM155AB1AL88 458 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 F5H5T6 163 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SLCO1B7G3V0H7 640 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 H3BNX3 289 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 LIN7AO14910 233 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ADAM12O43184 909 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 ATXN1LP0C7T5 689 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 CSRP3P50461 194 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MSLNQ13421 630 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SERINC3Q13530 473 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TRIP4Q15650 581 aaPredicted RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 HABP4Q5JVS0 413 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MAP3K21Q5TCX8 1036 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MSANTD2Q6P1R3 559 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 FIP1L1Q6UN15 594 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 BEND5Q7L4P6 421 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 KBTBD6Q86V97 674 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 PDSS2Q86YH6 399 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 TRPC4APQ8TEL6 797 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 JADE3Q92613 823 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 GATA6Q92908 595 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 C8orf48Q96LL4 319 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 IER2Q9BTL4 223 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 EML4Q9HC35 981 aaKnown RBP8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MID1IP1Q9NPA3 183 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 SCN4AP35499 1836 aa8.76□□□□□ -1.01
LINC00558-201ENST00000569422 MYOCOSA0A1B0GUC4 107 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 TBKBP1A7MCY6 615 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 E7ENX8 843 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PSMD12O00232 456 aaPredicted RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SERPINF2P08697 491 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 RBP1P09455 135 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ME2P23368 584 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SLC6A4P31645 630 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 GNALP38405 381 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SLC11A1P49279 550 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PRKAA2P54646 552 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FOXA1P55317 472 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF423Q2M1K9 1284 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ISCA2Q86U28 154 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ZNF683Q8IZ20 524 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 FLCNQ8NFG4 579 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 OR4K2Q8NGD2 314 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 RAET1EQ8TD07 263 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 PPP2R3CQ969Q6 453 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 ATP6V1E2Q96A05 226 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 TSPAN17Q96FV3 270 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 CNDP1Q96KN2 507 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 C3orf30Q96M34 536 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 TSC22D3Q99576 134 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 BRINP2Q9C0B6 783 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SEMA4BQ9NPR2 832 aaPredicted RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 EVLQ9UI08 416 aaPredicted RBP8.75□□□□□ -1.01
LINC00558-201ENST00000569422 GRXCR2A6NFK2 248 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SUPT3HB4E1H0 165 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 NPHS1O60500 1241 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 SUPT3HO75486 399 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 RHOBTB1O94844 696 aa8.75□□□□□ -1.01
LINC00558-201ENST00000569422 EOMESO95936 686 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms