RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 ST3GAL5Q9UNP4 418 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 EI24O14681 340 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 TNPO2O14787 897 aaKnown RBP17.12■□□□□ 0.33
VAC14-210ENST00000568548 MATN3O15232 486 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 SLC7A1P30825 629 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 ATP1A4Q13733 1029 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 OR4D1Q15615 310 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 DDR2Q16832 855 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 NHSL2Q5HYW2 709 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 SMYD5Q6GMV2 418 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 TMEM26Q6ZUK4 368 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 SLC15A3Q8IY34 581 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 SGCDQ92629 289 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 EXOC2Q96KP1 924 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 MEAF6Q9HAF1 191 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 CLK4Q9HAZ1 481 aaKnown RBP17.12■□□□□ 0.33
VAC14-210ENST00000568548 PNPLA3Q9NST1 481 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 OSER1Q9NX31 292 aa17.12■□□□□ 0.33
VAC14-210ENST00000568548 UXTQ9UBK9 157 aaPredicted RBP17.12■□□□□ 0.33
VAC14-210ENST00000568548 GOLGA8CPA6NN73 597 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 J3QRK9 145 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 CDK14O94921 469 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 PAMP19021 973 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 CD247P20963 164 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 AGTR2P50052 363 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ESRRGP62508 458 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 POU4F1Q01851 419 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 HERC3Q15034 1050 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 POLD3Q15054 466 aaPredicted RBP17.11■□□□□ 0.33
VAC14-210ENST00000568548 UGT3A2Q3SY77 523 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 LDLRAP1Q5SW96 308 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 RGMBQ6NW40 437 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 LARP4Q71RC2 724 aaKnown RBP eCLIP17.11■□□□□ 0.33
VAC14-210ENST00000568548 SAPCD2Q86UD0 394 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 FBXL8Q96CD0 374 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 CDK15Q96Q40 435 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 SLC25A23Q9BV35 468 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 EML4Q9HC35 981 aaKnown RBP17.11■□□□□ 0.33
VAC14-210ENST00000568548 CMTM6Q9NX76 183 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 PRRC2BQ5JSZ5 2229 aaKnown RBP17.11■□□□□ 0.33
VAC14-210ENST00000568548 DHRS12A0PJE2 317 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 HAS3O00219 553 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 DLGAP1O14490 977 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ANGPT2O15123 496 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 F9P00740 461 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 C8BP07358 591 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ADRA1AP35348 466 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 PFKPQ01813 784 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 SAMD4BQ5PRF9 694 aaKnown RBP17.11■□□□□ 0.33
VAC14-210ENST00000568548 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 OR2T3Q8NH03 318 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 TUBB1Q9H4B7 451 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ARMC7Q9H6L4 198 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 POLR1BQ9H9Y6 1135 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ABI2Q9NYB9 513 aaPredicted RBP17.11■□□□□ 0.33
VAC14-210ENST00000568548 TMEM181Q9P2C4 612 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
VAC14-210ENST00000568548 ATE1O95260 518 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 CCNCP24863 283 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 TPP2P29144 1249 aaPredicted RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 GGT5P36269 586 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 HADHAP40939 763 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 GEMP55040 296 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 IRF5Q13568 498 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 SEMA3AQ14563 771 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 RFTN1Q14699 578 aaPredicted RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 FSCN1Q16658 493 aaKnown RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 ZNF678Q5SXM1 525 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 OGFOD2Q6N063 350 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 GIPC3Q8TF64 312 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 VPS50Q96JG6 964 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 NSMCE4AQ9NXX6 385 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 A0A1W2PQH9 124 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 TCRBV3S1A0A5B6 114 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 E9PAM4 449 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 GPR39O43194 453 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 CRCPO75575 148 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 SNAP29O95721 258 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 HSPA1AP0DMV8 641 aaKnown RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 HSPA1BP0DMV9 641 aaKnown RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 COL6A2P12110 1019 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 HCAR3P49019 387 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 SERPINH1P50454 418 aaKnown RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 CLCN2P51788 898 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 BNIP3Q12983 259 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 PMS2P3Q13401 168 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 FGD3Q5JSP0 725 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 LIMS2Q7Z4I7 341 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 CILP2Q8IUL8 1156 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 TWIST2Q8WVJ9 160 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 ISOC1Q96CN7 298 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 IKZF3Q9UKT9 509 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 A0A087X1B8 175 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 C17orf102A2RUQ5 167 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 SCAMP3O14828 347 aaKnown RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 GPX3P22352 226 aa17.1■□□□□ 0.33
VAC14-210ENST00000568548 CDKN1CP49918 316 aaPredicted RBP17.1■□□□□ 0.33
VAC14-210ENST00000568548 CDK9P50750 372 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms