RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 RANBP10Q6VN20 620 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PPP1R21Q6ZMI0 780 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 SYDE1Q6ZW31 735 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 HSD11B1LQ7Z5J1 315 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DCLK2Q8N568 766 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 TAB3Q8N5C8 712 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 DNAAF3Q8N9W5 541 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 GLIS1Q8NBF1 620 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 KIF18AQ8NI77 898 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 CENPTQ96BT3 561 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 SMOC1Q9H4F8 434 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 WDR26Q9H7D7 661 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ARNT2Q9HBZ2 717 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 NFKBIL1Q9UBC1 381 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PCYOX1Q9UHG3 505 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 SHOC2Q9UQ13 582 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 ANKRD6Q9Y2G4 727 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 PKP3Q9Y446 797 aa12.16□□□□□ -0.46
SF3B3-208ENST00000567250 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 LRP4O75096 1905 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 A0A1B0GVT2 93 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 A0A1W2PR77 199 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 C2orf81A6NN90 581 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TLR4O00206 839 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 CACNB4O00305 520 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 PDE2AO00408 941 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 NDC80O14777 642 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 RAD51BO15315 384 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 USP12O75317 370 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 URI1O94763 535 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 SUN1O94901 812 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 PIRTP0C851 137 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 ZSCAN5DPP0CG00 497 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TPSB2P20231 275 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 KELP23276 732 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 HTR1BP28222 390 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TEAD1P28347 426 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 ARRB1P49407 418 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 VPS41P49754 854 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 CLDN2P57739 230 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 NXPH1P58417 271 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 DR1Q01658 176 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 PTSQ03393 145 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 GPS1Q13098 491 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 LAMB3Q13751 1172 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 SF3A2Q15428 464 aaKnown RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TAF1AQ15573 450 aaPredicted RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TPSAB1Q15661 275 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 WHAMMP3Q1A5X7 153 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 WSCD2Q2TBF2 565 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 RAET1GQ6H3X3 334 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TCEAL6Q6IPX3 200 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 Q6ZVL8 140 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TECPR1Q7Z6L1 1165 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 NLRP8Q86W28 1048 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 KLHL7Q8IXQ5 586 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TCEAL3Q969E4 200 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 AP2M1Q96CW1 435 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 PLEKHG4BQ96PX9 1271 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 C19orf43Q9BQ61 176 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 GTPBP2Q9BX10 602 aaKnown RBP12.15□□□□□ -0.46
SF3B3-208ENST00000567250 ERVMER34-1Q9H9K5 563 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 TMEM9BQ9NQ34 198 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 ASIC3Q9UHC3 531 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 CDC23Q9UJX2 597 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 SLCO1B1Q9Y6L6 691 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 GON4LQ3T8J9 2241 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 BPTFQ12830 3046 aa12.15□□□□□ -0.46
SF3B3-208ENST00000567250 POM121BA6NF01 834 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 H0Y8X5 98 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 WNT1P04628 370 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 GM2AP17900 193 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 CTSKP43235 329 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 GPR1P46091 355 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 SPINT3P49223 89 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 CCT8P50990 548 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PFN3P60673 137 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 IRX4P78413 519 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 ARHGAP8P85298 464 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PTK6Q13882 451 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PDE1CQ14123 709 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-208ENST00000567250 SPARCL1Q14515 664 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 NFATC4Q14934 902 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-208ENST00000567250 CDKN3Q16667 212 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PDPK2PQ6A1A2 396 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PNCKQ6P2M8 343 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 LAYNQ6UX15 382 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 MACC1Q6ZN28 852 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 Q6ZSR6 202 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PCGF5Q86SE9 256 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PRUNE1Q86TP1 453 aa12.14□□□□□ -0.47
SF3B3-208ENST00000567250 PARGQ86W56 976 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms