RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SPINK2P20155 84 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 NFKBIAP25963 317 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ITGB7P26010 798 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 HNF1BP35680 557 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 PXNP49023 591 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 FAM193AP78312 1265 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 LRRC32Q14392 662 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 STAT4Q14765 748 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 PTPRRQ15256 657 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 TAF1AQ15573 450 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 HSF5Q4G112 596 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 EOGTQ5NDL2 527 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 TSTD2Q5T7W7 516 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 FAM46CQ5VWP2 391 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ESRP1Q6NXG1 681 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 MMAAQ8IVH4 418 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 IQCKQ8N0W5 287 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 MDGA1Q8NFP4 955 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 OR2T3Q8NH03 318 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 OR2W6PQ8NHA6 318 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 RPLP0P6Q8NHW5 317 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 HCAR2Q8TDS4 363 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 FBF1Q8TES7 1133 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF778Q96MU6 729 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ZIM3Q96PE6 472 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 MCCC1Q96RQ3 725 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 CCDC77Q9BR77 488 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 RSPH9Q9H1X1 276 aaPredicted RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ACBD3Q9H3P7 528 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 TRABDQ9H4I3 376 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 FBRSQ9HAH7 460 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 MAGEE1Q9HCI5 957 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 DYRK4Q9NR20 520 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 TREX1Q9NSU2 369 aa11.1□□□□□ -0.63
SF3B3-205ENST00000564899 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
SF3B3-205ENST00000564899 EML5Q05BV3 1969 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 C1orf232A0A0U1RR37 186 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 ZCWPW2A0A1B0GU75 182 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 EXOC1LA0A1B0GW35 172 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 NPIPB15A6NHN6 443 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 C2orf81A6NN90 581 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 GIPC1O14908 333 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 ATP8B1O43520 1251 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 BUD23O43709 281 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 LRP3O75074 770 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 ALDH1A2O94788 518 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 IVLP07476 585 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CYP2A6P11509 494 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 TIMP2P16035 220 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 PAMP19021 973 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CXCL12P48061 93 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CCR3P51677 355 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF140P52738 457 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 METAP1P53582 386 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 EIF3BP55884 814 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 SHC2P98077 582 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 PDE1BQ01064 536 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 FRG1Q14331 258 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 EFTUD2Q15029 972 aaKnown RBP eCLIP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CNGA3Q16281 694 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 UGP2Q16851 508 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 LONRF1Q17RB8 773 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 KLHL38Q2WGJ6 581 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 LRRC73Q5JTD7 316 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF776Q68DI1 518 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 KIAA0930Q6ICG6 404 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 TCEAL6Q6IPX3 200 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 KIAA1211LQ6NV74 962 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 TRMT10BQ6PF06 316 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CACUL1Q86Y37 369 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 TTC30BQ8N4P2 665 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 OR13C4Q8NGS5 318 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 STYXQ8WUJ0 223 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CDKL2Q92772 493 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 TCEAL3Q969E4 200 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 SCRN2Q96FV2 425 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CERS2Q96G23 380 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 DNAJC1Q96KC8 554 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 LYSMD1Q96S90 227 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 CYTH2Q99418 400 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 PPANQ9NQ55 473 aaKnown RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 C20orf96Q9NUD7 363 aaPredicted RBP11.09□□□□□ -0.63
SF3B3-205ENST00000564899 B4GALT6Q9UBX8 382 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 SLC2A6Q9UGQ3 507 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 RIMKLBQ9ULI2 386 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 PPIL1Q9Y3C6 166 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 KCTD3Q9Y597 815 aa11.09□□□□□ -0.63
SF3B3-205ENST00000564899 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms