RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	SLC17A7	Q9P2U7	560 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MORF4L1	Q9UBU8	362 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MED1	Q15648	1581 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288		H3BM21	787 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288		K7ENM7	598 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	EEF2K	O00418	725 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	POU4F1	Q01851	419 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	TPRG1L	Q5T0D9	272 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC26A9	Q7LBE3	791 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	FUNDC2	Q9BWH2	189 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DCSTAMP	Q9H295	470 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GAREM1	Q9H706	876 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	OGDHL	Q9ULD0	1010 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CYP3A4	P08684	503 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	DDOST	P39656	456 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	TIGD3	Q6B0B8	471 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CDC73	Q6P1J9	531 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	METAP1D	Q6UB28	335 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	LSMEM1	Q8N8F7	131 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SHC3	Q92529	594 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	COA1	Q9GZY4	146 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	KIDINS220	Q9ULH0	1771 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CCDC195	A0A1B0GUA6	201 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288		J3QRK9	145 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CKMT2	P17540	419 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MAPKAPK2	P49137	400 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ITK	Q08881	620 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	ATP6AP1	Q15904	470 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SETMAR	Q53H47	684 aa	Predicted RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	SDR42E1	Q8WUS8	393 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	FBXL8	Q96CD0	374 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	COL21A1	Q96P44	957 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	HSD17B14	Q9BPX1	270 aa		4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	MRPL4	Q9BYD3	311 aa	Known RBP	4.26	□□□□□ -1.73
MACF1-231	ENST00000564288	CREBBP	Q92793	2442 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	FADD	Q13158	208 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TIGD6	Q17RP2	521 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PCDHB3	Q9Y5E6	796 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	DLGAP1	O14490	977 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CST1	P01037	141 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	RPL3	P39023	403 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	HECTD3	Q5T447	861 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PKN3	Q6P5Z2	889 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ANGPTL8	Q6UXH0	198 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	COA7	Q96BR5	231 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	INVS	Q9Y283	1065 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	FKBP7	Q9Y680	259 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PLIN4	Q96Q06	1357 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	DIP2C	Q9Y2E4	1556 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TPST1	O60507	370 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CDH4	P55283	916 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CORO6	Q6QEF8	472 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	C10orf90	Q96M02	699 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	NCKAP1	Q9Y2A7	1128 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	NALCN	Q8IZF0	1738 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	MYO1G	B0I1T2	1018 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288		F5H6K3	240 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ADAM12	O43184	909 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	SSX5	O60225	188 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	KLRC2	P26717	231 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TDG	Q13569	410 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM131A	Q6UXB0	335 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF276	Q8N554	614 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	COPZ2	Q9P299	210 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB19	A4D1S5	217 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	RNASEH2A	O75792	299 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	MSX2	P35548	267 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF57	Q68EA5	555 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	RHBDF2	Q6PJF5	856 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	AGMO	Q6ZNB7	445 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	AZIN2	Q96A70	460 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PNMA5	Q96PV4	448 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	REEP1	Q9H902	201 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	RGS17	Q9UGC6	210 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TBC1D30	Q9Y2I9	924 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	PIGN	O95427	931 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CYP3A5	P20815	502 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	MYL9	P24844	172 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	P2RX3	P56373	397 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	FLI1	Q01543	452 aa	Predicted RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	METTL2B	Q6P1Q9	378 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TIGD4	Q8IY51	512 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	NIM1K	Q8IY84	436 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM199	Q8N511	208 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	C7orf31	Q8N865	590 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC35B4	Q969S0	331 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	DGCR6L	Q9BY27	220 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CRISPLD1	Q9H336	500 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CHST12	Q9NRB3	414 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	UBQLN1	Q9UMX0	589 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	OAZ1	P54368	228 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CLCA4	Q14CN2	919 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	NAPEPLD	Q6IQ20	393 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CYP2R1	Q6VVX0	501 aa		4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	CELF1	Q92879	486 aa	Known RBP	4.25	□□□□□ -1.73
MACF1-231	ENST00000564288	XKR8	Q9H6D3	395 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms