RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 H3BNH8 94 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 S100A3P33764 101 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 RPL38P63173 70 aaKnown RBP12.61□□□□□ -0.39
COMMD4-209ENST00000564068 TRIM63Q969Q1 353 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.61□□□□□ -0.39
COMMD4-209ENST00000564068 CRLS1Q9UJA2 301 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 PSME2Q9UL46 239 aa12.61□□□□□ -0.39
COMMD4-209ENST00000564068 C4AP0C0L4 1744 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 C4BP0C0L5 1744 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CRYBG1Q9Y4K1 1723 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 C5orf58C9J3I9 102 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 RPL10P27635 214 aaKnown RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SLC5A2P31639 672 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 PIK3CGP48736 1102 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 NDUFV1P49821 464 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 MOGQ16653 247 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 PTPRNQ16849 979 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CNSTQ6PJW8 725 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 LEMD2Q8NC56 503 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 GAB3Q8WWW8 586 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CLPBQ9H078 707 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 REEP1Q9H902 201 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 EXD2Q9NVH0 621 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 MPP6Q9NZW5 540 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SERPINI2O75830 405 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SLC25A27O95847 323 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 ABCB1P08183 1280 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SOAT1P35610 550 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CHRNA4P43681 627 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 NDST2P52849 883 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 RAB15P59190 212 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TRAP1Q12931 704 aaKnown RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 DPYSL2Q16555 572 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 PPP1R3AQ16821 1122 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SOWAHAQ2M3V2 549 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TPK1Q9H3S4 243 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TBCCD1Q9NVR7 557 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TUBGCP4Q9UGJ1 667 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 KLHL3Q9UH77 587 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 ZNHIT2Q9UHR6 403 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TBC1D30Q9Y2I9 924 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 PRG3Q9Y2Y8 225 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 IPPQ9Y573 584 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 C10orf71Q711Q0 1435 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CCL15-CCL14A0A0B4J2E2 113 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 HNRNPCL2B2RXH8 293 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 NDUFS2O75306 463 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SIX3O95343 332 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 ZBTB48P10074 688 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CDC42EP1Q00587 391 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CCL15Q16663 113 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 CEP78Q5JTW2 689 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 FKBP1CQ5VVH2 108 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TMEM53Q6P2H8 277 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 TAS1R3Q7RTX0 852 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 P2RY8Q86VZ1 359 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 HS6ST3Q8IZP7 471 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 LZTR1Q8N653 840 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 LPCAT1Q8NF37 534 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 HAPLN3Q96S86 360 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-209ENST00000564068 GLOD4Q9HC38 313 aa12.6□□□□□ -0.39
COMMD4-209ENST00000564068 STRCP1A6NGW2 1772 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 RAMP2O60895 175 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 FARP2O94887 1054 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 AHSGP02765 367 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 PTPRAP18433 802 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 PTPN9P43378 593 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 HERC3Q15034 1050 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 PSMD5Q16401 504 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 FGD3Q5JSP0 725 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ERMP1Q7Z2K6 904 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ZNF605Q86T29 641 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 C19orf18Q8NEA5 215 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 CLHC1Q8NHS4 586 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 ENKURQ8TC29 256 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 MCOLN3Q8TDD5 553 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 CD320Q9NPF0 282 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 SAMHD1Q9Y3Z3 626 aaKnown RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 MSCO60682 206 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 MTPNP58546 118 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 IL2P60568 153 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 RAB39AQ14964 217 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 DENND5AQ6IQ26 1287 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 PDPRQ8NCN5 879 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 FAM45AQ8TCE6 357 aa12.59□□□□□ -0.39
COMMD4-209ENST00000564068 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
COMMD4-209ENST00000564068 STRA6Q9BX79 667 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms