RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SAE1Q9UBE0 346 aaPredicted RBP5.28□□□□□ -1.56
VPS35P1-201ENST00000563400 CRNNQ9UBG3 495 aaPredicted RBP5.28□□□□□ -1.56
VPS35P1-201ENST00000563400 STRAPQ9Y3F4 350 aaKnown RBP5.28□□□□□ -1.56
VPS35P1-201ENST00000563400 SNX14Q9Y5W7 946 aa5.28□□□□□ -1.56
VPS35P1-201ENST00000563400 LRP5O75197 1615 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MYH14Q7Z406 1995 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 HTR3EA5X5Y0 456 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 GLTPD2A6NH11 291 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 EIF3CLB5ME19 914 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 SOCS6O14544 535 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 PPEF2O14830 753 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CLIC2O15247 247 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CTIFO43310 598 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 AVILO75366 819 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 IL18BPO95998 194 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CD19P15391 556 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 TNFRSF1AP19438 455 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CHRM3P20309 590 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 HTR7P34969 479 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MDH1P40925 334 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CASRP41180 1078 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CENPAP49450 140 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 KHKP50053 298 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 RAB28P51157 221 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 PNLIPRP2P54317 469 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 LILRA4P59901 499 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 RPL15P61313 204 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 GCNT1Q02742 428 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CCDC15Q0P6D6 951 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 PGM5Q15124 567 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 STILQ15468 1287 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 AAK1Q2M2I8 961 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MGAT5BQ3V5L5 792 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MCMDC2Q4G0Z9 681 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 FBLN7Q53RD9 439 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 BICRALQ6AI39 1079 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 TEPPQ6URK8 271 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CLEC9AQ6UXN8 241 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 PDCL2Q8N4E4 241 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 ANKRD53Q8N9V6 530 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MBD3L2Q8NHZ7 208 aaPredicted RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 TBC1D16Q8TBP0 767 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 ROBO4Q8WZ75 1007 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CNOT9Q92600 299 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 RABGGTAQ92696 567 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 SCAMP4Q969E2 229 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 EDC3Q96F86 508 aaKnown RBP5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CEP295NLQ96MC4 621 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF558Q96NG5 402 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 KCNK16Q96T55 309 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MEIS3Q99687 375 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 PAAF1Q9BRP4 392 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 CARD6Q9BX69 1037 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 OSGEPL1Q9H4B0 414 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 NGBQ9NPG2 151 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 SEMA3GQ9NS98 782 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MOCS1Q9NZB8 636 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 DTLQ9NZJ0 730 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 HDAC6Q9UBN7 1215 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 STX8Q9UNK0 236 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 SSX2IPQ9Y2D8 614 aa5.27□□□□□ -1.57
VPS35P1-201ENST00000563400 MED23Q9ULK4 1368 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 KIAA1217Q5T5P2 1943 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 A0A0A6YYC8 382 aaPredicted RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ANXA2P2A6NMY6 339 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 KDM4EB2RXH2 506 aaPredicted RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 I3L1I5 382 aaPredicted RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TEX33O43247 280 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ZC3H11AO75152 810 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 NME6O75414 186 aaPredicted RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 RECQL4O94761 1208 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 AGFG2O95081 481 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SCAF4O95104 1147 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GASTP01350 101 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PRLRP16471 622 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 KCNA3P22001 575 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC16A2P36021 539 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PBX1P40424 430 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GLRBP48167 497 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SUOXP51687 545 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 MVDP53602 400 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 GALCP54803 685 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ST8SIA6P61647 398 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 SP2Q02086 613 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PPIGQ13427 754 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 RAPSNQ13702 412 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CBFBQ13951 182 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 RAB3GAP1Q15042 981 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 IQCB1Q15051 598 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 PCOLCEQ15113 449 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 CEBPEQ15744 281 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ZSCAN23Q3MJ62 389 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 NOMO2Q5JPE7 1267 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 ZNF529Q6P280 563 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 TSSK4Q6SA08 328 aa5.26□□□□□ -1.57
VPS35P1-201ENST00000563400 USP50Q70EL3 339 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms