RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 LIN7CQ9NUP9 197 aaKnown RBP4.72□□□□□ -1.65
CHD9-206ENST00000562791 SEPT11Q9NVA2 429 aaKnown RBP4.72□□□□□ -1.65
CHD9-206ENST00000562791 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
CHD9-206ENST00000562791 AATFQ9NY61 560 aaKnown RBP eCLIP4.72□□□□□ -1.65
CHD9-206ENST00000562791 PLEKHB1Q9UF11 243 aaPredicted RBP4.72□□□□□ -1.65
CHD9-206ENST00000562791 TAGLN3Q9UI15 199 aa4.72□□□□□ -1.65
CHD9-206ENST00000562791 DAPP1Q9UN19 280 aa4.72□□□□□ -1.65
CHD9-206ENST00000562791 R3HDM2Q9Y2K5 976 aaKnown RBP4.72□□□□□ -1.65
CHD9-206ENST00000562791 SNX5Q9Y5X3 404 aa4.72□□□□□ -1.65
CHD9-206ENST00000562791 GAPVD1Q14C86 1478 aa4.72□□□□□ -1.65
CHD9-206ENST00000562791 TRIM64A6NGJ6 449 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 TRIM64BA6NI03 449 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 HAT1O14929 419 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 YKT6O15498 198 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 ZSCAN12O43309 604 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 KLHL41O60662 606 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 EIF2S1P05198 315 aaKnown RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 CYP21A2P08686 494 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 LYL1P12980 280 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 KRT13P13646 458 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 PSMA4P25789 261 aaKnown RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 HPDP32754 393 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 UBA7P41226 1012 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 HTR3AP46098 478 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 MCM2P49736 904 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 ACADVLP49748 655 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 GPC3P51654 580 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 PNLIPRP1P54315 467 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 GEMIN4P57678 1058 aaKnown RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 DSTNP60981 165 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 KRT83P78385 493 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 GALNT1Q10472 559 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 BLMHQ13867 455 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 PTK2BQ14289 1009 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 HNF4GQ14541 408 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 MAPRE2Q15555 327 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 WHAMMP3Q1A5X7 153 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 C15orf59Q2T9L4 293 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 GALNTL6Q49A17 601 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 CAVIN4Q5BKX8 364 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 CCDC183Q5T5S1 534 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 OTUD1Q5VV17 481 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 METTL11BQ5VVY1 283 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 LIN54Q6MZP7 749 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 GGT6Q6P531 493 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 CORO6Q6QEF8 472 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 CCDC129Q6ZRS4 1044 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 FAM83HQ6ZRV2 1179 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 C3orf62Q6ZUJ4 267 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 TOGARAM2Q6ZUX3 1019 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 BZW1Q7L1Q6 419 aaKnown RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 CCDC83Q8IWF9 413 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 SPICE1Q8N0Z3 855 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 SLC2A12Q8TD20 617 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 MAIP1Q8WWC4 291 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 IRGQQ8WZA9 623 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 TSGA13Q96PP4 275 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 NPAS1Q99742 590 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 RTKNQ9BST9 563 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 KATNAL1Q9BW62 490 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 SPZ1Q9BXG8 430 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 TRPV6Q9H1D0 765 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 KLHL31Q9H511 634 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 BICC1Q9H694 974 aaKnown RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 EBF2Q9HAK2 575 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 PDE11AQ9HCR9 933 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 NLRC4Q9NPP4 1024 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 NDUFA13Q9P0J0 144 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 WDR35Q9P2L0 1181 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 SUCLA2Q9P2R7 463 aaPredicted RBP4.71□□□□□ -1.66
CHD9-206ENST00000562791 EXOC6BQ9Y2D4 811 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 ABCA5Q8WWZ7 1642 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 FHAD1B1AJZ9 1412 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 RTEL1-TNFRSF6BF6WH68 1400 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 ERBINQ96RT1 1412 aa4.71□□□□□ -1.66
CHD9-206ENST00000562791 INSRP06213 1382 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 GPRASP1Q5JY77 1395 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.7□□□□□ -1.66
CHD9-206ENST00000562791 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 GPR75-ASB3A0A0A6YYF3 556 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 NPIPB13A6NJU9 1138 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 NPIPB5A8MRT5 1133 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 NPIPB4C9JG80 1138 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 STMND1H3BQB6 276 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 EBAG9O00559 213 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 ACOT8O14734 319 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 NDC80O14777 642 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 SULT1B1O43704 296 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 DAB1O75553 588 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 ZFYP08048 801 aaPredicted RBP4.7□□□□□ -1.66
CHD9-206ENST00000562791 PDIA3P30101 505 aaKnown RBP4.7□□□□□ -1.66
CHD9-206ENST00000562791 ALDH3A1P30838 453 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 HOXD3P31249 432 aaPredicted RBP4.7□□□□□ -1.66
CHD9-206ENST00000562791 MTHFRP42898 656 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 PPP3CCP48454 512 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 ZP1P60852 638 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 CDK18Q07002 472 aa4.7□□□□□ -1.66
CHD9-206ENST00000562791 SNCBQ16143 134 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms