RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 RBM43Q6ZSC3 357 aaKnown RBP12.97□□□□□ -0.33
SF3B3-202ENST00000562722 USP45Q70EL2 814 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 HSD11B1LQ7Z5J1 315 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 NRROSQ86YC3 692 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 ATPAF2Q8N5M1 289 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 AOPEPQ8N6M6 819 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CCDC112Q8NEF3 446 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 PATE1Q8WXA2 126 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 HSPH1Q92598 858 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CCDC74BQ96LY2 380 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 NSMCE3Q96MG7 304 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 CDH19Q9H159 772 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 TRNAU1APQ9NX07 287 aaKnown RBP12.97□□□□□ -0.33
SF3B3-202ENST00000562722 MYO6Q9UM54 1294 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 PHTF1Q9UMS5 762 aa12.97□□□□□ -0.33
SF3B3-202ENST00000562722 IGHV5-10-1A0A0J9YXX1 117 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 HTRA2O43464 458 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 SFTPCP11686 197 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 ATP1A3P13637 1013 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 CTPS1P17812 591 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 LHCGRP22888 699 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 AMPD1P23109 780 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 MPSTP25325 297 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 ACTR1BP42025 376 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 MMP13P45452 471 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 GPR1P46091 355 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 ACTR1AP61163 376 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 MAXP61244 160 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 CTBSQ01459 385 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 TRAF2Q12933 501 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 TBR1Q16650 682 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 CLPPQ16740 277 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 ARMC12Q5T9G4 340 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 MARC1Q5VT66 337 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 Q6ZVL8 140 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 CYP4V2Q6ZWL3 525 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 APTXQ7Z2E3 356 aaKnown RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 TRIM11Q96F44 468 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 SYT11Q9BT88 431 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 FRMD8Q9BZ67 464 aaPredicted RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 MRPL47Q9HD33 250 aaKnown RBP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.96□□□□□ -0.33
SF3B3-202ENST00000562722 KCNK4Q9NYG8 393 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 CD84Q9UIB8 345 aa12.96□□□□□ -0.33
SF3B3-202ENST00000562722 TENM4Q6N022 2769 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PSMD11O00231 422 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ARHGAP6O43182 974 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PGLSO95336 258 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 FUCA1P04066 466 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 WT1P19544 449 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 CD1CP29017 333 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 SERPINB6P35237 376 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ADCY8P40145 1251 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 GPR3P46089 330 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 CSRP3P50461 194 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ITKQ08881 620 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 KLHL30Q0D2K2 578 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 NCAPHQ15003 741 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PTPRRQ15256 657 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF574Q6ZN55 896 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ATG14Q6ZNE5 492 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ZNF438Q7Z4V0 828 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 TSPAN33Q86UF1 283 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 FAM129CQ86XR2 697 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 NDUFAF2Q8N183 169 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PGBD5Q8N414 524 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 IL22RA1Q8N6P7 574 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 AGBL5Q8NDL9 886 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 AHCYL2Q96HN2 611 aaKnown RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 OR2M4Q96R27 311 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 TAAR9Q96RI9 348 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 MGME1Q9BQP7 344 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 B3GNT4Q9C0J1 378 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 NAT10Q9H0A0 1025 aaKnown RBP12.95□□□□□ -0.34
SF3B3-202ENST00000562722 STARD5Q9NSY2 213 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 ETNK2Q9NVF9 386 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 TMEM98Q9Y2Y6 226 aa12.95□□□□□ -0.34
SF3B3-202ENST00000562722 MAFKO60675 156 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 IVLP07476 585 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 MYBL1P10243 752 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 GZMAP12544 262 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 CR2P20023 1033 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 IL1R2P27930 398 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 PCK1P35558 622 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 EPHB1P54762 984 aa12.94□□□□□ -0.34
SF3B3-202ENST00000562722 CDH6P55285 790 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms