RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 DSC1Q08554 894 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 MERTKQ12866 999 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GRIK2Q13002 908 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CEACAM7Q14002 265 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 INAQ16352 499 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 FAM83EQ2M2I3 478 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PPP6R3Q5H9R7 873 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 RBM48Q5RL73 367 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CCNYL2Q5T2Q4 361 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 FSTL4Q6MZW2 842 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 FAM183BPQ6ZVS7 135 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CHSY3Q70JA7 882 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 METTL23Q86XA0 190 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PROSER1Q86XN7 944 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TBC1D21Q8IYX1 336 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SFRP1Q8N474 314 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 DNAAF3Q8N9W5 541 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 OR6B3Q8NGW1 331 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 STYXQ8WUJ0 223 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 ELMO3Q96BJ8 720 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SDCCAG3Q96C92 435 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TMA16Q96EY4 203 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 DNAJC1Q96KC8 554 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SCYL1Q96KG9 808 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SENP8Q96LD8 212 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 AGAP3Q96P47 875 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CSPG4P5Q96PW8 444 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CGREF1Q99674 301 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GPR22Q99680 433 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TMEM175Q9BSA9 504 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TRIM62Q9BVG3 475 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GATA5Q9BWX5 397 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PRKD2Q9BZL6 878 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 DHX35Q9H5Z1 703 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 UBE2ZQ9H832 354 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 COQ10BQ9H8M1 238 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 MOV10Q9HCE1 1003 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TLR9Q9NR96 1032 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CCM2LQ9NUG4 571 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 TBC1D13Q9NVG8 400 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 INTS10Q9NVR2 710 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 MIOSQ9NXC5 875 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 GMIPQ9P107 970 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 AAR2Q9Y312 384 aaKnown RBP8.57□□□□□ -1.04
CCDC33-209ENST00000560565 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
CCDC33-209ENST00000560565 DENND4CQ5VZ89 1909 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 RNF103-CHMP3A0A140T963 221 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 RNF103O00237 685 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 MRASO14807 208 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 XPO1O14980 1071 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 TRIM24O15164 1050 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 SPTLC1O15269 473 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 SUPT3HO75486 399 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 GMNNO75496 209 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 RNASEH2AO75792 299 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 SUPT7LO94864 414 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 PIGNO95427 931 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 METTL18O95568 372 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 ALDH2P05091 517 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 C2P06681 752 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 BMP1P13497 986 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 HSD17B1P14061 328 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 STMN1P16949 149 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 KCNA5P22460 613 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 JAK1P23458 1154 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 IL4RP24394 825 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 MGAT1P26572 445 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 HTR7P34969 479 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 IRS1P35568 1242 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 CAPGP40121 348 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 PBX3P40426 434 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 HLCSP50747 726 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 KCNQ1P51787 676 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 CLCNKBP51801 687 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 BCAT1P54687 386 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 GABARAPL2P60520 117 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 POU4F1Q01851 419 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 TNK2Q07912 1038 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 CDH17Q12864 832 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 MMRN1Q13201 1228 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 FASTKQ14296 549 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 PAFAH1B3Q15102 231 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 MAPRE1Q15691 268 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 TRIM16LQ309B1 348 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 ARL13BQ3SXY8 428 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 ARL13AQ5H913 290 aaPredicted RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 NHSL2Q5HYW2 709 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 AGAP9Q5VTM2 703 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 BROXQ5VW32 411 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 PDE12Q6L8Q7 609 aaKnown RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 LRRC8EQ6NSJ5 796 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 OLFML1Q6UWY5 402 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 RAB44Q7Z6P3 723 aaPredicted RBP8.56□□□□□ -1.04
CCDC33-209ENST00000560565 KCNMB4Q86W47 210 aa8.56□□□□□ -1.04
CCDC33-209ENST00000560565 ZNF786Q8N393 782 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms