RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PER2O15055 1255 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 TLX3O43711 291 aaPredicted RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 FESP07332 822 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 KLRC2P26717 231 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 PCDH1Q08174 1060 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZCCHC9Q8N567 271 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 C14orf166Q9Y224 244 aaKnown RBP13.85□□□□□ -0.19
CSPG4P12-202ENST00000559989 ATP7BP35670 1465 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CHADO15335 359 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 FCGRTP55899 365 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SNRPD1P62314 119 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 ADIGQ0VDE8 80 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SPATA20Q8TB22 786 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SMG7Q92540 1137 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 LENG9Q96B70 501 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 AP2M1Q96CW1 435 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 TBCCD1Q9NVR7 557 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 PCDHB5Q9Y5E4 795 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 MICAL2O94851 1124 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 TLR1Q15399 786 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 KLHL26Q53HC5 615 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPR156Q8NFN8 814 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 MRPL9Q9BYD2 267 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SEC14L3Q9UDX4 400 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF451Q9Y4E5 1061 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 PTPN9P43378 593 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CLCN5P51795 746 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 VLDLRP98155 873 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 RPL6Q02878 288 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAAP100Q0VG06 881 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 LIPMQ5VYY2 423 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CHSY3Q70JA7 882 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CEP295NLQ96MC4 621 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 GULP1Q9UBP9 304 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 IFT52Q9Y366 437 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 LINGO3P0C6S8 592 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 ELAVL2Q12926 359 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 ALG10BQ5I7T1 473 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 GPR180Q86V85 440 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 COMTD1Q86VU5 262 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 ADAM32Q8TC27 787 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CELF6Q96J87 481 aaKnown RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC22A4Q9H015 551 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 DCDC2CA8MYV0 355 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 XYLBO75191 536 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SLC9B1Q4ZJI4 515 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR2AJ1Q8NGZ0 328 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 HIF3AQ9Y2N7 669 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 A0A0G2JMP0 313 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 FABP12A6NFH5 140 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 CASP9P55211 416 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAM189A2Q15884 450 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 KCTD8Q6ZWB6 473 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 OR4M2Q8NGB6 313 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 SUSD6Q92537 303 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 KLF15Q9UIH9 416 aa13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 BARX2Q9UMQ3 279 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P12-202ENST00000559989 HCN1O60741 890 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 FUKQ8N0W3 1084 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 AGAP11Q8TF27 550 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 KLHL15Q96M94 604 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 KXD1Q9BQD3 176 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 IL1RAPQ9NPH3 570 aa13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.19
CSPG4P12-202ENST00000559989 FAM83AQ86UY5 434 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 PADI2Q9Y2J8 665 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 WFS1O76024 890 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 POMCP01189 267 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 KCNK1O00180 336 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 FGF10O15520 208 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ETS2P15036 469 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF823P16415 610 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 APLP1P51693 650 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 AIMP2Q13155 320 aaKnown RBP13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 LGI2Q8N0V4 545 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 MPP5Q8N3R9 675 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 RNF181Q9P0P0 153 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 MATN4O95460 622 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 MMP10P09238 476 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 SSTR1P30872 391 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 PARP6Q2NL67 630 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 IDNKQ5T6J7 187 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 CD300LFQ8TDQ1 290 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ASB12Q8WXK4 309 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 KCNN3Q9UGI6 736 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 PCDHGB7Q9Y5F8 929 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 CPSF1Q10570 1443 aaKnown RBP13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 TRIM64CA6NLI5 447 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 CD2P06729 351 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 ZNF3P17036 446 aa13.83□□□□□ -0.2
CSPG4P12-202ENST00000559989 GADD45AP24522 165 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms