RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 NUDCD1Q96RS6 583 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ASPSCR1Q9BZE9 553 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CDH19Q9H159 772 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 ADNPQ9H2P0 1102 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SUDS3Q9H7L9 328 aaPredicted RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 MRPL47Q9HD33 250 aaKnown RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GEMIN8Q9NWZ8 242 aaKnown RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 GOLGA6AQ9NYA3 693 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 CWC15Q9P013 229 aaKnown RBP9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SUFUQ9UMX1 484 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SLC17A4Q9Y2C5 497 aa9.16□□□□□ -0.94
HDDC3-204ENST00000559834 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 CPP00450 1065 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 FTLP02792 175 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 FUCA1P04066 466 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 PYGLP06737 847 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 FGF3P11487 239 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 GZMAP12544 262 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 GM2AP17900 193 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 MAN1A1P33908 653 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 PCK1P35558 622 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 ADCY8P40145 1251 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 ETV3P41162 512 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 GPR1P46091 355 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 GPLD1P80108 840 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 CTBSQ01459 385 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 DPTQ07507 201 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 DPYSQ14117 519 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 CNGA3Q16281 694 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 MARC1Q5VT66 337 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 RAET1GQ6H3X3 334 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 BORAQ6PGQ7 559 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 SLC30A9Q6PML9 568 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 TMCO3Q6UWJ1 677 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 ZNF574Q6ZN55 896 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 Q6ZVL8 140 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 USP45Q70EL2 814 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 HSD11B1LQ7Z5J1 315 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 NLRP8Q86W28 1048 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 LRRC49Q8IUZ0 686 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 NPWQ8N729 165 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 RCBTB1Q8NDN9 531 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 JPH3Q8WXH2 748 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 NKD1Q969G9 470 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 AHCYL2Q96HN2 611 aaKnown RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 CCDC74BQ96LY2 380 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 PEBP4Q96S96 227 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 NUDT22Q9BRQ3 303 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 DDA1Q9BW61 102 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 FRMD8Q9BZ67 464 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 NOD2Q9HC29 1040 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 SLC39A1Q9NY26 324 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 KCNK4Q9NYG8 393 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 TAS2R14Q9NYV8 317 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 CNOT8Q9UFF9 292 aaKnown RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 PPIL1Q9Y3C6 166 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 SCINQ9Y6U3 715 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 ARHGEF17Q96PE2 2063 aaPredicted RBP9.15□□□□□ -0.94
HDDC3-204ENST00000559834 LRRK1Q38SD2 2015 aa9.15□□□□□ -0.94
HDDC3-204ENST00000559834 IGHV1OR21-1A0A087WYE8 117 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TTC24A2A3L6 582 aaPredicted RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 B4E171 279 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TERTO14746 1132 aaKnown RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 PPM1DO15297 605 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 PGLSO95336 258 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 MYBL1P10243 752 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CR2P20023 1033 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 AMPD1P23109 780 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CES1P23141 567 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 SERPINB6P35237 376 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TSPAN7P41732 249 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 ACTR1BP42025 376 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 MMP13P45452 471 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 NOP2P46087 812 aaKnown RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CCR10P46092 362 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 POLD2P49005 469 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 PPM1FP49593 454 aaPredicted RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CDH6P55285 790 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 RAB15P59190 212 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 ACTR1AP61163 376 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CYP4F2P78329 520 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 LRP8Q14114 963 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 STX1AQ16623 288 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 NKAIN2Q5VXU1 208 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TMEM71Q6P5X7 295 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 CLEC17AQ6ZS10 378 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 RBM43Q6ZSC3 357 aaKnown RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TECPR1Q7Z6L1 1165 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 NAGSQ8N159 534 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 PELI3Q8N2H9 469 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 OR10G6Q8NH81 332 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 ART4Q93070 314 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 AP2M1Q96CW1 435 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
HDDC3-204ENST00000559834 SCARF2Q96GP6 870 aaPredicted RBP9.14□□□□□ -0.95
HDDC3-204ENST00000559834 NSMCE3Q96MG7 304 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms