RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 FCRL5Q96RD9 977 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 CDC6Q99741 560 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 TEX101Q9BY14 249 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 DNAJC28Q9NX36 388 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 ANGPTL2Q9UKU9 493 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 DNPEPQ9ULA0 475 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 PLEKHM1Q9Y4G2 1056 aa12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-207ENST00000558936 KIF26BQ2KJY2 2108 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 CHD8Q9HCK8 2581 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 FAM221BA6H8Z2 402 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 GAPDHSO14556 408 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 PMPCBO75439 489 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 METTL18O95568 372 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 RBP3P10745 1247 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 TSHRP16473 764 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 JUNDP17535 347 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 MTM1Q13496 603 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 NFATC4Q14934 902 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 OASLQ15646 514 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 PCSK7Q16549 785 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 TMC3Q7Z5M5 1100 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 TRIM74Q86UV6 250 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 PARGQ86W56 976 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 DCP2Q8IU60 420 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 PHACTR4Q8IZ21 702 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 TTC30BQ8N4P2 665 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 GPR26Q8NDV2 337 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 ADAMTS14Q8WXS8 1223 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 IFT43Q96FT9 208 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 COX14Q96I36 57 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 CALR3Q96L12 384 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 SCNM1Q9BWG6 230 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 SHOC2Q9UQ13 582 aa12.62□□□□□ -0.39
RABGGTA-207ENST00000558936 ZZEF1O43149 2961 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 HACD1B0YJ81 288 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 YY2O15391 372 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 FFAR2O15552 330 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 GPR39O43194 453 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 IPO7O95373 1038 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 AGTP01019 485 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 HOXC4P09017 264 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ETS1P14921 441 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CES1P23141 567 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 PSMB4P28070 264 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 SPINT3P49223 89 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 WNT3AP56704 352 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 KIAA1024LP59773 190 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CDK3Q00526 305 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CDK18Q07002 472 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 DPTQ07507 201 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC14A2Q15849 920 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 KHDC1Q4VXA5 237 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 SIRPB2Q5JXA9 342 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ANKRD20A2Q5SQ80 823 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ZNF648Q5T619 568 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CFAP58Q5T655 872 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ANKRD20A1Q5TYW2 823 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ANKRD20A3Q5VUR7 823 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 KCTD11Q693B1 232 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 ENPP7Q6UWV6 458 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 RANBP10Q6VN20 620 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 HEATR4Q86WZ0 1026 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CCDC112Q8NEF3 446 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 OR4C6Q8NH72 309 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 GATA6Q92908 595 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 NUS1Q96E22 293 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CCDC97Q96F63 343 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 CNDP2Q96KP4 475 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 RIOK2Q9BVS4 552 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 TMEM168Q9H0V1 697 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 RABGEF1Q9UJ41 708 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 KCTD3Q9Y597 815 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 KNTC1P50748 2209 aa12.61□□□□□ -0.39
RABGGTA-207ENST00000558936 MAP1BP46821 2468 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 A0A1W2PQ67 120 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 PSMD11O00231 422 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 ENC1O14682 589 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 TNFSF14O43557 240 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 TRIM16O95361 564 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 HK3P52790 923 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 SRP54P61011 504 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 RPL26P61254 145 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 CAMK2BQ13554 666 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 DEFB133Q30KQ1 61 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 NLRP8Q86W28 1048 aa12.6□□□□□ -0.39
RABGGTA-207ENST00000558936 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms