RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 INPP4BO15327 924 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 FZD6O60353 706 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 BRINP1O60477 761 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 USP12O75317 370 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 TRBC1P01850 177 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 SLC4A1P02730 911 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 MMP2P08253 660 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 AK4P27144 223 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 ITPKBP27987 946 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 GPR1P46091 355 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 KIAA1024LP59773 190 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 SKOR1P84550 965 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 PTSQ03393 145 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 ADCY2Q08462 1091 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CDCP2Q5VXM1 449 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 SLC9A4Q6AI14 798 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 TECPR1Q7Z6L1 1165 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 GKN2Q86XP6 184 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CBARPQ8N350 705 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 SDR16C5Q8N3Y7 309 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 ATL2Q8NHH9 583 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 SCG3Q8WXD2 468 aaKnown RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 GLMNQ92990 594 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CCDC74AQ96AQ1 378 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 NXPE2Q96DL1 559 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 MCCC1Q96RQ3 725 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CCDC3Q9BQI4 270 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 RIOK2Q9BVS4 552 aaKnown RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 TDRD1Q9BXT4 1180 aaKnown RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 C10orf88Q9H8K7 445 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 PCDH9Q9HC56 1237 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 PHPT1Q9NRX4 125 aaPredicted RBP12.5□□□□□ -0.41
SMAD3-208ENST00000558827 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 UBP1Q9NZI7 540 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 LCMT1Q9UIC8 334 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
SMAD3-208ENST00000558827 CACNA1GO43497 2377 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 ADAMTS20P59510 1910 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 TRBV23OR9-2A0A075B6M9 112 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 PRSS38A1L453 326 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 CST8O60676 142 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 ASMTLO95671 621 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 CEACAM5P06731 702 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 TRIM23P36406 574 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 EIF2S3P41091 472 aaKnown RBP12.49□□□□□ -0.41
SMAD3-208ENST00000558827 RPIAP49247 311 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 NAP1L1P55209 391 aaKnown RBP12.49□□□□□ -0.41
SMAD3-208ENST00000558827 CCL7P80098 99 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 CDK3Q00526 305 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 PPIDQ08752 370 aaKnown RBP12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SPA17Q15506 151 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 QPCTQ16769 361 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 RALGPS1Q5JS13 557 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SPOCD1Q6ZMY3 1216 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 CCDC50Q8IVM0 306 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 NDUFAF2Q8N183 169 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SPATA22Q8NHS9 363 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 KRT35Q92764 455 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 AP2M1Q96CW1 435 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 DEPDC7Q96QD5 511 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 HEMGNQ9BXL5 484 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 DPEP2Q9H4A9 486 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 ARFGAP3Q9NP61 516 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SPATS2LQ9NUQ6 558 aaKnown RBP12.49□□□□□ -0.41
SMAD3-208ENST00000558827 WDR70Q9NW82 654 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 DDX56Q9NY93 547 aaKnown RBP12.49□□□□□ -0.41
SMAD3-208ENST00000558827 INTUQ9ULD6 942 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SUFUQ9UMX1 484 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 PRKAB1Q9Y478 270 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 GPSM3Q9Y4H4 160 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 DUSP10Q9Y6W6 482 aa12.49□□□□□ -0.41
SMAD3-208ENST00000558827 LAMA5O15230 3695 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 A0A1W2PNU3 283 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 PMPCBO75439 489 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 MT-CYBP00156 380 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 GP1BAP07359 652 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 MYCLP1P12525 358 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 KELP23276 732 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 NFKBIAP25963 317 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 CYLC1P35663 651 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 CDKN2BP42772 138 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 SLC1A1P43005 524 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 STC1P52823 247 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 MAZP56270 477 aaKnown RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 GABREP78334 506 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 IFI35P80217 286 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 CCDC173Q0VFZ6 552 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 PDK1Q15118 436 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ZNF648Q5T619 568 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-208ENST00000558827 LRRC38Q5VT99 294 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 ALS2CLQ60I27 953 aa12.48□□□□□ -0.41
SMAD3-208ENST00000558827 SLC30A9Q6PML9 568 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms