RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SBK1Q52WX2 424 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 UGT2A3Q6UWM9 527 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ZZZ3Q8IYH5 903 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OR5K1Q8NHB7 308 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CHPT1Q8WUD6 406 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SSU72Q9NP77 194 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 FAM118AQ9NWS6 357 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 AURKAO14965 403 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MARCKSL1P49006 195 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PRKG2Q13237 762 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HID1Q8IV36 788 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ALDH16A1Q8IZ83 802 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LNX1Q8TBB1 728 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RDH12Q96NR8 316 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKRA2Q9H9E1 313 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PCDHGA11Q9Y5H2 935 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CUX2O14529 1486 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SERPINB7O75635 380 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RSL1D1O76021 490 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ITGA2P17301 1181 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MPSTP25325 297 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TGFBR2P37173 567 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CRY1Q16526 586 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CD300LFQ8TDQ1 290 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PANX3Q96QZ0 392 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CEP41Q9BYV8 373 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 UNCXA6NJT0 531 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MYL12BO14950 172 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC15A1P46059 708 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 Q3C1V9 767 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TBRG1Q3YBR2 411 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SUPT20HL1Q3ZLR7 823 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OR8K3Q8NH51 312 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RDH11Q8TC12 318 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 POF1BQ8WVV4 589 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LRRC58Q96CX6 371 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MTMR12Q9C0I1 747 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SPAG4Q9NPE6 437 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TNPO3Q9Y5L0 923 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SOBPA7XYQ1 873 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 EIF3DO15371 548 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HTRA2O43464 458 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC2A2P11168 524 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MAPK1P28482 360 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ALDH7A1P49419 539 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SUZ12Q15022 739 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLC25A24Q6NUK1 477 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 AHSA2Q719I0 299 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 C3orf58Q8NDZ4 430 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PTCD2Q8WV60 388 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CNTNAP3BQ96NU0 1288 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ARPC5LQ9BPX5 153 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 GMIPQ9P107 970 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NUP50Q9UKX7 468 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MGAT4AQ9UM21 535 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 IFNA6P05013 189 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MYL9P24844 172 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CADM2Q8N3J6 435 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PPP3R2Q96LZ3 170 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 WWOXQ9NZC7 414 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PPIEQ9UNP9 301 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 HMGXB3Q12766 1538 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 SLITRK5O94991 958 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CLIC3O95833 236 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CYP11A1P05108 521 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 EIF2S3P41091 472 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NETO2Q8NC67 525 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 GLIS3Q8NEA6 775 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKRD49Q8WVL7 239 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OR2B2Q9GZK3 357 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 AS3MTQ9HBK9 375 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKHQ9HCJ1 492 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 PLEKHG1Q9ULL1 1385 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MTRF1O75570 445 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 MATN1P21941 496 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RFX3P48380 749 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CCDC58Q4VC31 144 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RNASEH2BQ5TBB1 312 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 FAM91A1Q658Y4 838 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 GHDCQ8N2G8 530 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TMEM176AQ96HP8 235 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NPLQ9BXD5 320 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 LEF1Q9UJU2 399 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RPH3AQ9Y2J0 694 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 BUD23O43709 281 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RENBPP51606 427 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RABL6Q3YEC7 729 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 KAT8Q9H7Z6 458 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ABCA1O95477 2261 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ABCC12Q96J65 1359 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 RGS14O43566 566 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 STX11O75558 287 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ECM1Q16610 540 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CYP2A13Q16696 494 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 ANKRD52Q8NB46 1076 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 REXO5Q96IC2 774 aaKnown RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 TRPV4Q9HBA0 871 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 NANSQ9NR45 359 aa3.69□□□□□ -1.82
ATXN3-248ENST00000558190 CCM2LQ9NUG4 571 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-248ENST00000558190 OCLNQ16625 522 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms