RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MCCP23508 829 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 DNAJB1P25685 340 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 SERPINA4P29622 427 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 PDIA3P30101 505 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 SLC16A2P36021 539 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ATRXP46100 2492 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 POLD2P49005 469 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 RASSF2P50749 326 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MRPL12P52815 198 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 RNASELQ05823 741 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 GABPAQ06546 454 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 PTPRSQ13332 1948 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ALKBH1Q13686 389 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 IL16Q14005 1332 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 LPAL2Q16609 132 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 SMTNL2Q2TAL5 461 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 CCDC38Q502W7 563 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 TTC22Q5TAA0 569 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 NCAPH2Q6IBW4 605 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 DGAT2L7PQ6IED9 249 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 AADACL2Q6P093 401 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ZNF517Q6ZMY9 492 aaPredicted RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 TECPR1Q7Z6L1 1165 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 CCDC105Q8IYK2 499 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 THNSL1Q8IYQ7 743 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 PTGR2Q8N8N7 351 aaPredicted RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 TDRD5Q8NAT2 981 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 OTUD7AQ8TE49 926 aaPredicted RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 CHURC1Q8WUH1 139 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 STYXQ8WUJ0 223 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ATP6V0A1Q93050 837 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ZNF347Q96SE7 839 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 CRB3Q9BUF7 120 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 DDX23Q9BUQ8 820 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 PABPC3Q9H361 631 aaKnown RBP4.08□□□□□ -1.76
CHD8-212ENST00000557329 EBF3Q9H4W6 596 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 PDE11AQ9HCR9 933 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MLXIPLQ9NP71 852 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 ENTPD7Q9NQZ7 604 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 SMC4Q9NTJ3 1288 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 HIF1ANQ9NWT6 349 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 CYP39A1Q9NYL5 469 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MSRB1Q9NZV6 116 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 LRFN1Q9P244 771 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 RAB21Q9UL25 225 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 VPS13AQ96RL7 3174 aa4.08□□□□□ -1.76
CHD8-212ENST00000557329 MYO10Q9HD67 2058 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 CACNA1FO60840 1977 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 ADGRA3Q8IWK6 1321 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 ZNF532Q9HCE3 1301 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 EPG5Q9HCE0 2579 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 CHD8Q9HCK8 2581 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 C17orf102A2RUQ5 167 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 AQP12BA6NM10 295 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 MDM4O15151 490 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 PRDM1O75626 825 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SURF6O75683 361 aaKnown RBP4.07□□□□□ -1.76
CHD8-212ENST00000557329 EPN2O95208 641 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 TOMM40O96008 361 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 GH1P01241 217 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 MYZAPP0CAP1 466 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SP9P0CG40 484 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 AOC1P19801 751 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SLC1A4P43007 532 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 STAT2P52630 851 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 ARHGAP8P85298 464 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 CSTF1Q05048 431 aaKnown RBP4.07□□□□□ -1.76
CHD8-212ENST00000557329 PMPCAQ10713 525 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 RAPGEF1Q13905 1077 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 PGM5Q15124 567 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 CCDC96Q2M329 555 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 PRTGQ2VWP7 1150 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 PLK5Q496M5 336 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 RARS2Q5T160 578 aaKnown RBP4.07□□□□□ -1.76
CHD8-212ENST00000557329 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CHD8-212ENST00000557329 C9orf47Q6ZRZ4 202 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 ZDHHC17Q8IUH5 632 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 WDR63Q8IWG1 891 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 FSIP1Q8NA03 581 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SPPL3Q8TCT6 385 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SCFD2Q8WU76 684 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 TRAPPC12Q8WVT3 735 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SLC25A28Q96A46 364 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 ADAD1Q96M93 576 aaKnown RBP4.07□□□□□ -1.76
CHD8-212ENST00000557329 MEIS3Q99687 375 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 WACQ9BTA9 647 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 SLC25A13Q9UJS0 675 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 GMEB2Q9UKD1 530 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 UTS2RQ9UKP6 389 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 RAB23Q9ULC3 237 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 PKD1L2Q7Z442 2459 aa4.07□□□□□ -1.76
CHD8-212ENST00000557329 NCOR2Q9Y618 2525 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 EP300Q09472 2414 aaPredicted RBP4.06□□□□□ -1.76
CHD8-212ENST00000557329 SAC3D1A6NKF1 404 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 ACKR2O00590 384 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 ATP2A1O14983 1001 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 NDUFB8O95169 186 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 MBD4O95243 580 aa4.06□□□□□ -1.76
CHD8-212ENST00000557329 KAT7O95251 611 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms