RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ATMQ13315 3056 aa9.15□□□□□ -0.95
GTF2A1-204ENST00000556268 LY6G6EA0A0G2JKS1 128 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 A0A1B0GVM2 712 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 F5H5T6 163 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CAPN9O14815 690 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 OPA1O60313 960 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 MOCS2O96007 188 aaPredicted RBP9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 MT-CO1P00395 513 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 APOEP02649 317 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC2A3P11169 496 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 MAT2AP31153 395 aaKnown RBP9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CCR1P32246 355 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 NUCB2P80303 420 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CFHR1Q03591 330 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 MTA1Q13330 715 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF284Q2VY69 593 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 SETMARQ53H47 684 aaPredicted RBP9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 PIP5KL1Q5T9C9 394 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ABI3BPQ7Z7G0 1075 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 DSG4Q86SJ6 1040 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CHSY1Q86X52 802 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ARHGEF19Q8IW93 802 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 LSMEM2Q8N112 164 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 SH2D3CQ8N5H7 860 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ATP6V0D2Q8N8Y2 350 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 TMIEQ8NEW7 156 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 FAM149B1Q96BN6 582 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 GPR27Q9NS67 375 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ASNSD1Q9NWL6 643 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 UCKL1Q9NWZ5 548 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 HS3ST2Q9Y278 367 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CA5BQ9Y2D0 317 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 COA3Q9Y2R0 106 aaPredicted RBP9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 CEP83Q9Y592 693 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 U3KQA8 63 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 COL6A6A6NMZ7 2263 aa9.14□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 DRGXA6NNA5 263 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 E5RJQ4 531 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 SCAMP1O15126 338 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC31A1O15431 190 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF821O75541 412 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 PIAS2O75928 621 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 SMC2O95347 1197 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 C8BP07358 591 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 GP1BAP07359 652 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 CTSLP07711 333 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 THEGLP0DJG4 465 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 HOXA5P20719 270 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ERVPABLB-1P60509 514 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 CDK17Q00537 523 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 CCDC173Q0VFZ6 552 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 CETN1Q12798 172 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF177Q13360 481 aaPredicted RBP9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 LSAMPQ13449 338 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 TTI2Q6NXR4 508 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 USP53Q70EK8 1073 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 C14orf80Q86SX3 495 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 HORMAD1Q86X24 394 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF683Q8IZ20 524 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF248Q8NDW4 579 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 OR2A12Q8NGT7 310 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 GRAMD1AQ96CP6 724 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 BMFQ96LC9 184 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 TIGD1Q96MW7 591 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 USP29Q9HBJ7 922 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 PCDHB1Q9Y5F3 818 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 ATP6V1DQ9Y5K8 247 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 HS3ST4Q9Y661 456 aa9.13□□□□□ -0.95
GTF2A1-204ENST00000556268 C1QTNF3-AMACRE9PGA6 284 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 H7BY64 318 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 RNF103O00237 685 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 PRODHO43272 600 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 MED7O43513 233 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 SDC3O75056 442 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CLDN11O75508 207 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 SRCP12931 536 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ZNF18P17022 549 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CHRNA3P32297 505 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CDH4P55283 916 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 RHDQ02161 417 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CCDC15Q0P6D6 951 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ACCSLQ4AC99 568 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 EFHC1Q5JVL4 640 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 RABGAP1LQ5R372 815 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 KDM7AQ6ZMT4 941 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ETV3LQ6ZN32 361 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 ENOSF1Q7L5Y1 443 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CIR1Q86X95 450 aaPredicted RBP9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 DEFB106AQ8N104 65 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC22A18ASQ8N1D0 253 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 NT5C3BQ969T7 300 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 APOLD1Q96LR9 279 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 C1orf74Q96LT6 269 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 SLC46A1Q96NT5 459 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 NOX5Q96PH1 765 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 PSMB7Q99436 277 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 DPH1Q9BZG8 443 aa9.12□□□□□ -0.95
GTF2A1-204ENST00000556268 CAAP1Q9H8G2 361 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms