RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MCM9Q9NXL9 1143 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 STON1Q9Y6Q2 735 aa3.46□□□□□ -1.86
SNX6-204ENST00000555541 BCAT2O15382 392 aaPredicted RBP3.45□□□□□ -1.86
SNX6-204ENST00000555541 CRLF1O75462 422 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 URODP06132 367 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 TUBBP07437 444 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 ITGA2P17301 1181 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 S1PR1P21453 382 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 POU1F1P28069 291 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 EIF2S3P41091 472 aaKnown RBP3.45□□□□□ -1.86
SNX6-204ENST00000555541 FMO5P49326 533 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 EFNA5P52803 228 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 TUBB4BP68371 445 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 EFNB1P98172 346 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 VEPH1Q14D04 833 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 ZNF766Q5HY98 468 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 KCNT1Q5JUK3 1230 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 LINGO2Q7L985 606 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 CPOQ8IVL8 374 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 C11orf65Q8NCR3 313 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 TRIM58Q8NG06 486 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 MAGEC3Q8TD91 643 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 HERVK_113Q902F9 699 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 TTYH1Q9H313 450 aaPredicted RBP3.45□□□□□ -1.86
SNX6-204ENST00000555541 HCFC1R1Q9NWW0 138 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 HSF4Q9ULV5 492 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 GPR52Q9Y2T5 361 aa3.45□□□□□ -1.86
SNX6-204ENST00000555541 AKR1B15C9JRZ8 316 aaPredicted RBP3.44□□□□□ -1.86
SNX6-204ENST00000555541 TACC1O75410 805 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 MT-CYBP00156 380 aaPredicted RBP3.44□□□□□ -1.86
SNX6-204ENST00000555541 GALTP07902 379 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 CYC1P08574 325 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 G6PDP11413 515 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 CCR5P51681 352 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 RAD23BP54727 409 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 UBE3AQ05086 875 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 BIRC2Q13490 618 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 CTF1Q16619 201 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 TCTN1Q2MV58 587 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 GRAMD1BQ3KR37 738 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 STXBP5Q5T5C0 1151 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 TMEM81Q6P7N7 255 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 LDHAL6AQ6ZMR3 332 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 ZNF852Q6ZMS4 543 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 TAOK1Q7L7X3 1001 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 DHX40Q8IX18 779 aaKnown RBP3.44□□□□□ -1.86
SNX6-204ENST00000555541 SLC35F3Q8IY50 421 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 ZNF34Q8IZ26 560 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 DSELQ8IZU8 1212 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 METTL27Q8N6F8 245 aaPredicted RBP3.44□□□□□ -1.86
SNX6-204ENST00000555541 ZNF599Q96NL3 588 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 BBS4Q96RK4 519 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 MAGEE1Q9HCI5 957 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 RIC8AQ9NPQ8 531 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 C20orf141Q9NUB4 165 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 BEX4Q9NWD9 120 aaPredicted RBP3.44□□□□□ -1.86
SNX6-204ENST00000555541 HSPB7Q9UBY9 170 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 RCOR1Q9UKL0 485 aa3.44□□□□□ -1.86
SNX6-204ENST00000555541 GOLGA6L9A6NEM1 432 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 TMEM202A6NGA9 273 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 GUCY1B2O75343 617 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 PRSS1P07477 247 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 HMGB1P09429 215 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 MAOAP21397 527 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 SHMT1P34896 483 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 PSMC2P35998 433 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 PGM1P36871 562 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 DCTP40126 519 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 IL15P40933 162 aaPredicted RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 TMPOP42166 694 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 CLCNKAP51800 687 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNX6-204ENST00000555541 PPFIA1Q13136 1202 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 TDGQ13569 410 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 NFIL3Q16649 462 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 HIST2H2ACQ16777 129 aaPredicted RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 KRT24Q2M2I5 525 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 EIF2S3LQ2VIR3 472 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 TXNDC8Q6A555 127 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 CPLX2Q6PUV4 134 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 SLC36A4Q6YBV0 504 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 LRRC8DQ7L1W4 858 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 KMT5CQ86Y97 462 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 ZCCHC9Q8N567 271 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 DUSP19Q8WTR2 217 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 NOC3LQ8WTT2 800 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 ZSCAN31Q96LW9 406 aaPredicted RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 HEMGNQ9BXL5 484 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 INTS2Q9H0H0 1204 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 BPIFA1Q9NP55 256 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 HCN3Q9P1Z3 774 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 CNOT7Q9UIV1 285 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 FAM96BQ9Y3D0 163 aa3.43□□□□□ -1.86
SNX6-204ENST00000555541 LSM4Q9Y4Z0 139 aaKnown RBP3.43□□□□□ -1.86
SNX6-204ENST00000555541 CTAGE9A4FU28 777 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 TAF4O00268 1085 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 PIP5K1CO60331 668 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 TFP02787 698 aa3.42□□□□□ -1.86
SNX6-204ENST00000555541 CTAGE8P0CG41 777 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms