RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 USP33Q8TEY7 942 aa9.95□□□□□ -0.82
PRKCH-211ENST00000555082 ERLEC1Q96DZ1 483 aa9.95□□□□□ -0.82
PRKCH-211ENST00000555082 SLC29A1Q99808 456 aa9.95□□□□□ -0.82
PRKCH-211ENST00000555082 TMEM79Q9BSE2 394 aa9.95□□□□□ -0.82
PRKCH-211ENST00000555082 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
PRKCH-211ENST00000555082 TMEM233B4DJY2 109 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 TSPAN3O60637 253 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 STAMBPO95630 424 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 HDCP19113 662 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 ME2P23368 584 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 CLCN4P51793 760 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 RALGDSQ12967 914 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 GPM6BQ13491 265 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MANEALQ5VSG8 457 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 POTEHQ6S545 545 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 LAYNQ6UX15 382 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 STRA8Q7Z7C7 330 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 FAM110BQ8TC76 370 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 P2RY11Q96G91 374 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MYRFLQ96LU7 910 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 FCRL3Q96P31 734 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 CIB1Q99828 191 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 OSBPL2Q9H1P3 480 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 GMPR2Q9P2T1 348 aaKnown RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 EBF1Q9UH73 591 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 SNX13Q9Y5W8 968 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 A0A096LPK6 155 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 G3V2L1 256 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 SEC24DO94855 1032 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 PIGNO95427 931 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MBL2P11226 248 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 PSMB4P28070 264 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 AVPR1AP37288 418 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MAGEA6P43360 314 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 SGSHP51688 502 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MAPK10P53779 464 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 MTX3Q5HYI7 312 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 KRT80Q6KB66 452 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 GK5Q6ZS86 529 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 CLVS1Q8IUQ0 354 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 SPATA6LQ8N4H0 392 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 TMEM102Q8N9M5 508 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 ACMSDQ8TDX5 336 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 APOL2Q9BQE5 337 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 APOL5Q9BWW9 433 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 EMILIN2Q9BXX0 1053 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 SUDS3Q9H7L9 328 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 RCOR3Q9P2K3 495 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-211ENST00000555082 GREB1Q4ZG55 1949 aa9.94□□□□□ -0.82
PRKCH-211ENST00000555082 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PRSS51A0A1B0GVH4 220 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 TK2O00142 265 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 COQ9O75208 318 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 GCATO75600 419 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 STC2O76061 302 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 VAPBO95292 243 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZFXP17010 805 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZNF26P17031 533 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 CKMT2P17540 419 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 TPSB2P20231 275 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 CNTFP26441 200 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 VARSP26640 1264 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PRDX6P30041 224 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 MAGEA8P43361 318 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 AIF1P55008 147 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 NAA20P61599 178 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 RPS24P62847 133 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PAFAH1B3Q15102 231 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 TPSAB1Q15661 275 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 TMC8Q8IU68 726 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZNF683Q8IZ20 524 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 FNDC8Q8TC99 324 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 GIPC3Q8TF64 312 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZNF669Q96BR6 464 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 SCYL1Q96KG9 808 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 RPRD1AQ96P16 312 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 QKIQ96PU8 341 aaKnown RBP eCLIP9.93□□□□□ -0.824e-10■■■■■ 41.3
PRKCH-211ENST00000555082 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 SLC39A8Q9C0K1 460 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 OLA1Q9NTK5 396 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PLK2Q9NYY3 685 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZDHHC2Q9UIJ5 367 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PRPF19Q9UMS4 504 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 PCDHGA4Q9Y5G9 962 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZNF487B1APH4 448 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 TRIM13O60858 407 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 IGLV3-27P01718 113 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 CORO1AP31146 461 aaKnown RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 NAGLUP54802 743 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 SULT2A1Q06520 285 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 SLC44A4Q53GD3 710 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ARL13AQ5H913 290 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 FSTL4Q6MZW2 842 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ARHGAP12Q8IWW6 846 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 LGI2Q8N0V4 545 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 ZNF513Q8N8E2 541 aaPredicted RBP9.93□□□□□ -0.82
PRKCH-211ENST00000555082 CATSPER1Q8NEC5 780 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 OR52K1Q8NGK4 314 aa9.93□□□□□ -0.82
PRKCH-211ENST00000555082 HTR3CQ8WXA8 447 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms