RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PTSQ03393 145 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 GRIK2Q13002 908 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 MTM1Q13496 603 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 LAMB3Q13751 1172 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 OASLQ15646 514 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 QPCTQ16769 361 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 HLA-BQ31612 363 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 INAVAQ3KP66 663 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 LRRC73Q5JTD7 316 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 STPG1Q5TH74 334 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PAPD7Q5XG87 772 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 CRTC1Q6UUV9 634 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 KDELC2Q7Z4H8 507 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 CBARPQ8N350 705 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 CCDC110Q8TBZ0 833 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 RUNDC3BQ96NL0 473 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 FAM118BQ9BPY3 351 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 GPR63Q9BZJ6 419 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 GAREM1Q9H706 876 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 C10orf88Q9H8K7 445 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 LRRC40Q9H9A6 602 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 UBP1Q9NZI7 540 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PKD2L2Q9NZM6 624 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 R3HDM2Q9Y2K5 976 aaKnown RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 PCDHGB2Q9Y5G2 931 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
TMEM260-206ENST00000555046 MUC22E2RYF6 1773 aaPredicted RBP10.6□□□□□ -0.71
TMEM260-206ENST00000555046 C1orf232A0A0U1RR37 186 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 NEMP2A6NFY4 417 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 NPIPB15A6NHN6 443 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 USP27XA6NNY8 438 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 C4orf47A7E2U8 309 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 A8MX80 341 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 CACNB4O00305 520 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SPINT1O43278 529 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 PRKCGP05129 697 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 TSHRP16473 764 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 CTPS1P17812 591 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 TEAD1P28347 426 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 CASQ1P31415 396 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 CTSKP43235 329 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 RXRGP48443 463 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 LMAN1P49257 510 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 PFN3P60673 137 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SARNPP82979 210 aaKnown RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 DPTQ07507 201 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 RALGDSQ12967 914 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SNX1Q13596 522 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 FGL2Q14314 439 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 WSCD2Q2TBF2 565 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 LRRC66Q68CR7 880 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 DENND2CQ68D51 928 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 TCEAL6Q6IPX3 200 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 PNCKQ6P2M8 343 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 KDELC1Q6UW63 502 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 RANBP10Q6VN20 620 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 ZNF765Q7L2R6 523 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 PTAR1Q7Z6K3 402 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 MINDY1Q8N5J2 469 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 IPMKQ8NFU5 416 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 GRK7Q8WTQ7 553 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 BTN2A2Q8WVV5 523 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 ATG4AQ8WYN0 398 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 TCEAL3Q969E4 200 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 NUS1Q96E22 293 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 BMFQ96LC9 184 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 COQ10AQ96MF6 247 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 TRIB3Q96RU7 358 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 ELF4Q99607 663 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 KLF6Q99612 283 aaPredicted RBP10.59□□□□□ -0.71
TMEM260-206ENST00000555046 C19orf43Q9BQ61 176 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SLC32A1Q9H598 525 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 GPSM3Q9Y4H4 160 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 SNX11Q9Y5W9 270 aa10.59□□□□□ -0.71
TMEM260-206ENST00000555046 COL12A1Q99715 3063 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 SPTY2D1-AS1A0A0U1RR47 76 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 POM121BA6NF01 834 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 C2orf81A6NN90 581 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 H3BM21 787 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 KIF2AO00139 706 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-206ENST00000555046 CDX4O14627 284 aaPredicted RBP10.58□□□□□ -0.72
TMEM260-206ENST00000555046 PCDHGA12O60330 932 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 KCNK5O95279 499 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 CLDN7O95471 211 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 CRTAMO95727 393 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
TMEM260-206ENST00000555046 ALPIP09923 528 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 PSMB4P28070 264 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 HMGCLP35914 325 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 TRIM23P36406 574 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 CCT8P50990 548 aa10.58□□□□□ -0.72
TMEM260-206ENST00000555046 STC1P52823 247 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms