RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PPP1R16BQ96T49 567 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 R3HDMLQ9H3Y0 253 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 ABCB10Q9NRK6 738 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 DTLQ9NZJ0 730 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 BAG5Q9UL15 447 aa15.67■□□□□ 0.1
SYNE3-203ENST00000554873 CAB39Q9Y376 341 aaPredicted RBP15.67■□□□□ 0.1
SYNE3-203ENST00000554873 E2F8A0AVK6 867 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 SNAP29O95721 258 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 ENPP1P22413 925 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 MGAT1P26572 445 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 RRM2P31350 389 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 GARSP41250 739 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 NR2C2P49116 596 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 TMEM132DQ14C87 1099 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 KIZQ2M2Z5 673 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 RBM48Q5RL73 367 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 LBX2Q6XYB7 198 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 ACOT1Q86TX2 421 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF598Q86UK7 904 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 GIPC2Q8TF65 315 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 MUL1Q969V5 352 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 CSPG4P5Q96PW8 444 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 ING2Q9H160 280 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 FAM49BQ9NUQ9 324 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 UBA2Q9UBT2 640 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 C16orf96A6NNT2 1141 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF487B1APH4 448 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 POLR1CO15160 346 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 TPST1O60507 370 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 PIGNO95427 931 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 PTTG1O95997 202 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 CTRB1P17538 263 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 PSMA4P25789 261 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 RBP5P82980 135 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 DUSP7Q16829 419 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 CELF3Q5SZQ8 465 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 CTRB2Q6GPI1 263 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 IDO2Q6ZQW0 420 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 PLD6Q8N2A8 252 aaKnown RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 TOR1AIP2Q8NFQ8 470 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 MAGEE2Q8TD90 523 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 SLC35F5Q8WV83 523 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 HTR3CQ8WXA8 447 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 KLRG1Q96E93 195 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 KCTD15Q96SI1 283 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 TMEM246Q9BRR3 403 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 SLA2Q9H6Q3 261 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 SNX15Q9NRS6 342 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 PRMT7Q9NVM4 692 aaPredicted RBP15.66■□□□□ 0.1
SYNE3-203ENST00000554873 DPP3Q9NY33 737 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 NPAP1Q9NZP6 1156 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 SSC5DA1L4H1 1573 aa15.66■□□□□ 0.1
SYNE3-203ENST00000554873 HAT1O14929 419 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 XYLBO75191 536 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 SRP72O76094 671 aaKnown RBP15.65■□□□□ 0.1
SYNE3-203ENST00000554873 AXLP30530 894 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 S100A5P33763 92 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 POU6F1Q14863 301 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 AMHR2Q16671 573 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 ZNF181Q2M3W8 571 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 ARL13AQ5H913 290 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-203ENST00000554873 DESI1Q6ICB0 168 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 CCDC103Q8IW40 242 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 NETO2Q8NC67 525 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 BEST2Q8NFU1 509 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 CLEC4CQ8WTT0 213 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 LGMNQ99538 433 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 FTHL17Q9BXU8 183 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 DGCR6LQ9BY27 220 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 DDX28Q9NUL7 540 aaKnown RBP15.65■□□□□ 0.1
SYNE3-203ENST00000554873 OXSMQ9NWU1 459 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 SLCO3A1Q9UIG8 710 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 ZDHHC2Q9UIJ5 367 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 ZW10O43264 779 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 TSPAN9O75954 239 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 GABARAPO95166 117 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 LTFP02788 710 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 FCGR1AP12314 374 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 MLNP12872 115 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 BMP1P13497 986 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 CRHBPP24387 322 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 GALNT1Q10472 559 aaPredicted RBP15.65■□□□□ 0.1
SYNE3-203ENST00000554873 ATAD3CQ5T2N8 411 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 AGAP6Q5VW22 663 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 BSPRYQ5W0U4 402 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 NCBP2-AS2Q69YL0 99 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 FAM45BPQ6NSW5 357 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 OTOP3Q7RTS5 596 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 PIGZQ86VD9 579 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 RIOX2Q8IUF8 465 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 COLGALT1Q8NBJ5 622 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 LEMD2Q8NC56 503 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 OR6F1Q8NGZ6 308 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 FAM45AQ8TCE6 357 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 HDAC10Q969S8 669 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 MUS81Q96NY9 551 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 AGAP4Q96P64 663 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 LPIN3Q9BQK8 851 aa15.65■□□□□ 0.1
SYNE3-203ENST00000554873 MRPL45Q9BRJ2 306 aaKnown RBP15.65■□□□□ 0.1
SYNE3-203ENST00000554873 MORF4L1Q9UBU8 362 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms