RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GFAPP14136 432 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 POLR2EP19388 210 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GGT1P19440 569 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SERPINB6P35237 376 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RFC2P35250 354 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CBSP35520 551 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PBX3P40426 434 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ALDH1A3P47895 512 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CPT1AP50416 773 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CLCN3P51790 818 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 THOP1P52888 689 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HMGA2P52926 109 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 IGBP1P78318 339 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HPCAP84074 193 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 BIRC2Q13490 618 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PDK3Q15120 406 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CEBPEQ15744 281 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZBED5Q49AG3 693 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RBM48Q5RL73 367 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM201Q5SNT2 666 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TSEN54Q7Z6J9 526 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GPR149Q86SP6 731 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RTN4RL1Q86UN2 441 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PROSER1Q86XN7 944 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 NUDCD3Q8IVD9 361 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CROCCP3Q8IVE0 287 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ELMOD1Q8N336 334 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 OR10T2Q8NGX3 314 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RPS4Y2Q8TD47 263 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 DQX1Q8TE96 717 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 COPS5Q92905 334 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PTERQ96BW5 349 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PCED1BQ96HM7 432 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MAGEB10Q96LZ2 347 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 NDNQ99608 321 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HINFPQ9BQA5 517 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SOSTQ9BQB4 213 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TRIM31Q9BZY9 425 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MCOLN1Q9GZU1 580 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CLMPQ9H6B4 373 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF395Q9H8N7 513 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 OLA1Q9NTK5 396 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CMTM6Q9NX76 183 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SMPD4Q9NXE4 827 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TCEAL9Q9UHQ7 104 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TMEFF2Q9UIK5 374 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KCND3Q9UK17 655 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ACAD8Q9UKU7 415 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TRAPPC4Q9Y296 219 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ARPC4-TTLL3A0A0A6YYG9 625 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 C1orf226A1L170 272 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GLTPD2A6NH11 291 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 UBXN8O00124 270 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NME4O00746 187 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 AREL1O15033 823 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LSM1O15116 133 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SGTAO43765 313 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 B4GALT3O60512 393 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LRIG2O94898 1065 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 H6PDO95479 791 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 RECKO95980 971 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HLA-DQB1P01920 261 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 INHBAP08476 426 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GSTM1P09488 218 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TXNP10599 105 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF37AP17032 561 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HLA-DPA1P20036 260 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 EFNA1P20827 205 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SLC6A2P23975 617 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 GSTM2P28161 218 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 BAG6P46379 1132 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KCNC1P48547 511 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 HK3P52790 923 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 STC1P52823 247 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CRYBA2P53672 197 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ATXN1P54253 815 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 NR1H2P55055 460 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CDKN2DP55273 166 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PKNOX1P55347 436 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 SEMG2Q02383 582 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 FOLH1Q04609 750 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TAF11Q15544 211 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MAPRE2Q15555 327 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KCNT1Q5JUK3 1230 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 UBE2UQ5VVX9 321 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 MED25Q71SY5 747 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ADAT2Q7Z6V5 191 aaKnown RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PLEKHH3Q7Z736 793 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PHLDB2Q86SQ0 1253 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM150AQ86TG1 271 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD13BQ86YJ7 626 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM199Q8N511 208 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 KYQ8NBH2 561 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 APPL2Q8NEU8 664 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 PLD4Q96BZ4 506 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 AURKBQ96GD4 344 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CPB2Q96IY4 423 aa3.44□□□□□ -1.86
SEC23A-207ENST00000554615 LENG8Q96PV6 779 aaPredicted RBP3.44□□□□□ -1.86
SEC23A-207ENST00000554615 CDK5RAP1Q96SZ6 601 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms