RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 LCTLQ6UWM7 567 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 GFRALQ6UXV0 394 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 LDHAL6AQ6ZMR3 332 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 FOXRED2Q8IWF2 684 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 ZBTB2Q8N680 514 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 BBS10Q8TAM1 723 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 HERVK_113Q902F9 699 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 METTL2AQ96IZ6 378 aaKnown RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 H2AFJQ9BTM1 129 aa3.91□□□□□ -1.78
SCFD1-210ENST00000553693 TTC7AQ9ULT0 858 aaPredicted RBP3.91□□□□□ -1.78
SCFD1-210ENST00000553693 ARHGEF11O15085 1522 aa3.9□□□□□ -1.78
SCFD1-210ENST00000553693 PEG3Q9GZU2 1588 aa3.9□□□□□ -1.78
SCFD1-210ENST00000553693 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TEX13CA0A0J9YWL9 993 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 PAK4O96013 591 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 SERPINB2P05120 415 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 CYC1P08574 325 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 HLA-DOBP13765 273 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 CD53P19397 219 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 S1PR1P21453 382 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 METAP2P50579 478 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 CCR5P51681 352 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TERF1P54274 439 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 RNPS1Q15287 305 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TAF12Q16514 161 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 EIF2S3LQ2VIR3 472 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 SLC45A4Q5BKX6 768 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 DSG4Q86SJ6 1040 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 LRRTM4Q86VH4 590 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TMEM219Q86XT9 240 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TDRPQ86YL5 185 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 WDR63Q8IWG1 891 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 DHX40Q8IX18 779 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 RNF113BQ8IZP6 322 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 WDSUB1Q8N9V3 476 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 HUS1BQ8NHY5 278 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 ZCCHC10Q8TBK6 192 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 GRAPLQ8TC17 118 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 LRRC1Q9BTT6 524 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TRMT61BQ9BVS5 477 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 CSTL1Q9H114 145 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 GPR108Q9NPR9 543 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 TMEM30AQ9NV96 361 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 PPP1R14DQ9NXH3 145 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 HSPB7Q9UBY9 170 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 PADI1Q9ULC6 663 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 ERVK-11Q9UQG0 969 aa3.9□□□□□ -1.79
SCFD1-210ENST00000553693 LSM4Q9Y4Z0 139 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 PDS5AQ29RF7 1337 aaKnown RBP3.9□□□□□ -1.79
SCFD1-210ENST00000553693 MROH2BQ7Z745 1585 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 TAF4O00268 1085 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 DVL1O14640 695 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 PRSS1P07477 247 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 HOXB5P09067 269 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 CFC1BP0CG36 223 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 CFC1P0CG37 223 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 BDKRB2P30411 391 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 SHMT1P34896 483 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 ARL1P40616 181 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 EFNA5P52803 228 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 DVL1P1P54792 670 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 TDGQ13569 410 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 KLHDC8BQ8IXV7 354 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 C1orf87Q8N0U7 546 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 CNBD1Q8NA66 436 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 SLC20A1Q8WUM9 679 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 ABTB1Q969K4 478 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 GPR63Q9BZJ6 419 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 TTYH1Q9H313 450 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 PPP1R3EQ9H7J1 279 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 HINT3Q9NQE9 182 aaKnown RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 SLC25A10Q9UBX3 287 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 RALYQ9UKM9 306 aaKnown RBP3.89□□□□□ -1.79
SCFD1-210ENST00000553693 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 CEP164Q9UPV0 1460 aa3.89□□□□□ -1.79
SCFD1-210ENST00000553693 FANCD2Q9BXW9 1451 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 EIF3FO00303 357 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-210ENST00000553693 RNF224P0DH78 156 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 HSD3B1P14060 373 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 COX7A2P14406 83 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 ITGA2P17301 1181 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 TIMP3P35625 211 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 HALP42357 657 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 HOXA1P49639 335 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-210ENST00000553693 VEGFCP49767 419 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 EEF1A1P68104 462 aaKnown RBP3.88□□□□□ -1.79
SCFD1-210ENST00000553693 PDE1BQ01064 536 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 CAMK1Q14012 370 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 EEF1A1P5Q5VTE0 462 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 PLEKHA7Q6IQ23 1121 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 FBXO46Q6PJ61 603 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-210ENST00000553693 CPOQ8IVL8 374 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 CIARTQ8N365 385 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-210ENST00000553693 SPATA6LQ8N4H0 392 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 DUSP19Q8WTR2 217 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 ZNF583Q96ND8 569 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 HEMGNQ9BXL5 484 aa3.88□□□□□ -1.79
SCFD1-210ENST00000553693 IFIH1Q9BYX4 1025 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms