RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CCNYL3P0C7X3 344 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 SLC9A1P19634 815 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 F8A1P23610 371 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 NFKBIAP25963 317 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 CLCN1P35523 988 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 ACTR1BP42025 376 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 ACTR1AP61163 376 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 SEMA5AQ13591 1074 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 FAM72AQ5TYM5 149 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 FAM72DQ6L9T8 149 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 FAM72BQ86X60 149 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 SRRM1Q8IYB3 904 aaKnown RBP15.25■□□□□ 0.03
CACNB3-220ENST00000551716 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 PRR7Q8TB68 274 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 NCSTNQ92542 709 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 EPB41L1Q9H4G0 881 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 STN1Q9H668 368 aaKnown RBP15.25■□□□□ 0.03
CACNB3-220ENST00000551716 APMAPQ9HDC9 416 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 CROTQ9UKG9 612 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 SLC17A4Q9Y2C5 497 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 PCDHGA9Q9Y5G4 932 aaKnown RBP15.25■□□□□ 0.03
CACNB3-220ENST00000551716 PCDHGA6Q9Y5G7 932 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 POLQO75417 2590 aa15.25■□□□□ 0.03
CACNB3-220ENST00000551716 MED13Q9UHV7 2174 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 CDC14CA4D256 554 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 RASA4BC9J798 803 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 RASA4O43374 803 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 LSM8O95777 96 aaKnown RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 TEAD1P28347 426 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 EPHB2P29323 1055 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 SDC4P31431 198 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 BCL2L1Q07817 233 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 INPP5JQ15735 1006 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 EXOC3L4Q17RC7 722 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 C1QL3Q5VWW1 255 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 CRYBG3Q68DQ2 2970 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 KLHL10Q6JEL2 608 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 SRLQ86TD4 932 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 ZSWIM9Q86XI8 627 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 FMR1NBQ8N0W7 255 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 THAP4Q8WY91 577 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 NUS1Q96E22 293 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 STAMBPL1Q96FJ0 436 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 SCARF2Q96GP6 870 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 NOL6Q9H6R4 1146 aaKnown RBP15.24■□□□□ 0.03
CACNB3-220ENST00000551716 PCDHGB7Q9Y5F8 929 aa15.24■□□□□ 0.03
CACNB3-220ENST00000551716 A0A1W2PQ67 120 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 GTPBP10A4D1E9 387 aaKnown RBP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 SORBS2O94875 1100 aaKnown RBP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 MT-ND3P03897 115 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 PDGFAP04085 211 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 ANKRD34CP0C6C1 535 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 EPHA4P54764 986 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 CDK3Q00526 305 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 NSUN2Q08J23 767 aaKnown RBP eCLIP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 LRP8Q14114 963 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 IL11RAQ14626 422 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 TRNP1Q6NT89 227 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 STRADAQ7RTN6 431 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 HPS6Q86YV9 775 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 PLXDC1Q8IUK5 500 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 FAM71AQ8IYT1 594 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 UMODL1-AS1Q8N2C9 162 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 SFRP1Q8N474 314 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 LZTR1Q8N653 840 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 NTAN1Q96AB6 310 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 COQ10AQ96MF6 247 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 SLC25A23Q9BV35 468 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 KLC2Q9H0B6 622 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 CATSPERBQ9H7T0 1116 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 SARS2Q9NP81 518 aaKnown RBP15.23■□□□□ 0.03
CACNB3-220ENST00000551716 PADI1Q9ULC6 663 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 NEU3Q9UQ49 428 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 ST14Q9Y5Y6 855 aa15.23■□□□□ 0.03
CACNB3-220ENST00000551716 LDLRP01130 860 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 FURINP09958 794 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 GM2AP17900 193 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
CACNB3-220ENST00000551716 LEPRP48357 1165 aaKnown RBP15.22■□□□□ 0.03
CACNB3-220ENST00000551716 HHEXQ03014 270 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 FOXM1Q08050 763 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 CDO1Q16878 200 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 NADK2Q4G0N4 442 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.22■□□□□ 0.03
CACNB3-220ENST00000551716 PAPD7Q5XG87 772 aaKnown RBP15.22■□□□□ 0.03
CACNB3-220ENST00000551716 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 AVL9Q8NBF6 648 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 TTC13Q8NBP0 860 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 SLC37A2Q8TED4 501 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 C5orf34Q96MH7 638 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 OR2M4Q96R27 311 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 MLXIPLQ9NP71 852 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 SLAMF7Q9NQ25 335 aa15.22■□□□□ 0.03
CACNB3-220ENST00000551716 DNAJC12Q9UKB3 198 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms