RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 HUS1O60921 280 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 USP17L7P0C7H9 530 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 NCK1P16333 377 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 RXRGP48443 463 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 TAF6P49848 677 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 APLP1P51693 650 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 SPIDRQ14159 915 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 GRB7Q14451 532 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 NR1D2Q14995 579 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 MOGQ16653 247 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 ARL13BQ3SXY8 428 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 KIAA0930Q6ICG6 404 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 CHPT1Q8WUD6 406 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 EXT2Q93063 718 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 IFT80Q9P2H3 777 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 FNDC1Q4ZHG4 1894 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 SNAP91O60641 907 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 NOL3O60936 208 aaKnown RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 RBP1P09455 135 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 MAP4P27816 1152 aaKnown RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 RFC2P35250 354 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 GALNT1Q10472 559 aaPredicted RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 ZNF678Q5SXM1 525 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 CST9Q5W186 159 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 TAPT1Q6NXT6 567 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 PRMT9Q6P2P2 845 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 MINDY1Q8N5J2 469 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 DQX1Q8TE96 717 aaKnown RBP13.73□□□□□ -0.21
HDAC7-228ENST00000548938 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 GLOD4Q9HC38 313 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 ZFYVE28Q9HCC9 887 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 WDR37Q9Y2I8 494 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 NDUFAF1Q9Y375 327 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 DNAJC15Q9Y5T4 150 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 V9GYQ6 96 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 NRCAMQ92823 1304 aa13.73□□□□□ -0.21
HDAC7-228ENST00000548938 PAMP19021 973 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 CCNA2P20248 432 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 IMPDH1P20839 514 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 BDNFP23560 247 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-228ENST00000548938 HLCSP50747 726 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 MLLT10P55197 1068 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 UNC50Q53HI1 259 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 MARCH8Q5T0T0 291 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 GALNT18Q6P9A2 607 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 SLC22A9Q8IVM8 553 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 OR13F1Q8NGS4 319 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 LRRC58Q96CX6 371 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 PPP1R10Q96QC0 940 aaKnown RBP13.72□□□□□ -0.21
HDAC7-228ENST00000548938 FCRL5Q96RD9 977 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 FSD1LQ9BXM9 530 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 FAM49AQ9H0Q0 323 aaPredicted RBP13.72□□□□□ -0.21
HDAC7-228ENST00000548938 WDCPQ9H6R7 721 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 TMEM30AQ9NV96 361 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 PIP5K1BO14986 540 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 SULT1C4O75897 302 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 ANXA9O76027 345 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 CPNE6O95741 557 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 CD4P01730 458 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 C7P10643 843 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 IDO1P14902 403 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 ELK4P28324 431 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 ADRA1AP35348 466 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 FOXA1P55317 472 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 SH3BP2P78314 561 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 GPR158Q5T848 1215 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 USP51Q70EK9 711 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 LIMS2Q7Z4I7 341 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 PIM3Q86V86 326 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 MIER2Q8N344 545 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 UBXN10Q96LJ8 280 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 TSGA13Q96PP4 275 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 PKD2L2Q9NZM6 624 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 TMEM9Q9P0T7 183 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 GNPTGQ9UJJ9 305 aa13.72□□□□□ -0.21
HDAC7-228ENST00000548938 LRRC14BA6NHZ5 514 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 SOBPA7XYQ1 873 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GPIP06744 558 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 HALP42357 657 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GSK3BP49841 420 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 ACAP2Q15057 778 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GRIK4Q16099 956 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 GEN1Q17RS7 908 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 PYCR3Q53H96 274 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 HECTD2Q5U5R9 776 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 TBPL2Q6SJ96 375 aa13.71□□□□□ -0.21
HDAC7-228ENST00000548938 LDB1Q86U70 411 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-228ENST00000548938 SLC35B4Q969S0 331 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms