RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NUP62CLQ9H1M0 184 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 DPEP2Q9H4A9 486 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 RUBCNLQ9H714 662 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
TROAP-208ENST00000548817 LRIT1Q9P2V4 623 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 PNMA8BQ9ULN7 279 aaPredicted RBP8.5□□□□□ -1.05
TROAP-208ENST00000548817 ATP8A1Q9Y2Q0 1164 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 DGKBQ9Y6T7 804 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 NIPBLQ6KC79 2804 aaeCLIP8.5□□□□□ -1.05
TROAP-208ENST00000548817 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
TROAP-208ENST00000548817 RHPN2P1A8MT19 583 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 WASH4PA8MWX3 477 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 B4DGG1 531 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 AGRPO00253 132 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 TNFRSF10CO14798 259 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 TEX33O43247 280 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 CCP110O43303 1012 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PALMO75781 387 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PRKAR1AP10644 381 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 CHRNB2P17787 502 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 MAP4P27816 1152 aaKnown RBP8.49□□□□□ -1.05
TROAP-208ENST00000548817 MMP12P39900 470 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 CSNK1DP48730 415 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PPM1FP49593 454 aaPredicted RBP8.49□□□□□ -1.05
TROAP-208ENST00000548817 RENBPP51606 427 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 NDST2P52849 883 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 RAB15P59190 212 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 KIAA1024LP59773 190 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 TRA2AQ13595 282 aaKnown RBP eCLIP8.49□□□□□ -1.05
TROAP-208ENST00000548817 PEX6Q13608 980 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 ACOX1Q15067 660 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 AGERQ15109 404 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 MAP9Q49MG5 647 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 C14orf28Q4W4Y0 310 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PPP1R2P3Q6NXS1 205 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PIM3Q86V86 326 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
TROAP-208ENST00000548817 CAMK1DQ8IU85 385 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 TTC13Q8NBP0 860 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 RBM15Q96T37 977 aaKnown RBP eCLIP8.49□□□□□ -1.05
TROAP-208ENST00000548817 KLC2Q9H0B6 622 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 GANQ9H2C0 597 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 NOL6Q9H6R4 1146 aaKnown RBP8.49□□□□□ -1.05
TROAP-208ENST00000548817 SP110Q9HB58 689 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 CYP4F12Q9HCS2 524 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 KCTD5Q9NXV2 234 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 LHX3Q9UBR4 397 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 FZD10Q9ULW2 581 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 ENTPD4Q9Y227 616 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 KCNMB2Q9Y691 235 aa8.49□□□□□ -1.05
TROAP-208ENST00000548817 ANKHD1Q8IWZ3 2542 aaKnown RBP8.49□□□□□ -1.05
TROAP-208ENST00000548817 TACC2O95359 2948 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 TSPAN11A1L157 253 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 J3KR12 359 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 DFFAO00273 331 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 EEF2KO00418 725 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 NUDT21O43809 227 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 DUX1O43812 170 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 PRAMEF11O60813 436 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 RFPL1O75677 317 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 RECQL5O94762 991 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 HOXC4P09017 264 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 UNGP13051 313 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 CCL4P13236 92 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 TCN2P20062 427 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 CDK11BP21127 795 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 MAN1A1P33908 653 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 PAPOLAP51003 745 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 GSCP56915 257 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 JAM2P57087 298 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 ABHD18Q0P651 414 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 ILF3Q12906 894 aaKnown RBP eCLIP8.48□□□□□ -1.05
TROAP-208ENST00000548817 AMZ1Q400G9 498 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 SPECC1LQ69YQ0 1117 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 NLGN4XQ8N0W4 816 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 AGBL5Q8NDL9 886 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 NLGN4YQ8NFZ3 816 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 ENOX1Q8TC92 643 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 OR1E3Q8WZA6 343 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 STARD8Q92502 1023 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 FUBP1Q96AE4 644 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 PDXPQ96GD0 296 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 CELF6Q96J87 481 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 C5orf34Q96MH7 638 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 MCEEQ96PE7 176 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 PCDHB18PQ96TA0 734 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 AGPAT1Q99943 283 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 TRIT1Q9H3H1 467 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 DHX35Q9H5Z1 703 aaKnown RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 WDR26Q9H7D7 661 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 PHPT1Q9NRX4 125 aaPredicted RBP8.48□□□□□ -1.05
TROAP-208ENST00000548817 CHMP5Q9NZZ3 219 aa8.48□□□□□ -1.05
TROAP-208ENST00000548817 ERRFI1Q9UJM3 462 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms