RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ABCD1P33897 745 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 FUT6P51993 359 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SLC20A2Q08357 652 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ARL16Q0P5N6 197 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 NAE1Q13564 534 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 FGFBP1Q14512 234 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ZRSR1Q15695 479 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 CTF1Q16619 201 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TUBA1AQ71U36 451 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TAOK1Q7L7X3 1001 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SMIM29Q86T20 159 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 CCDC13Q8IYE1 715 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 EXOC8Q8IYI6 725 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ZNF34Q8IZ26 560 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 DSELQ8IZU8 1212 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 CNTROBQ8N137 903 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 MUC20Q8N307 709 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 SPATA6LQ8N4H0 392 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 FIG4Q92562 907 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ZUFSPQ96AP4 578 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TMEM19Q96HH6 336 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TUBA1CQ9BQE3 449 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 EVA1AQ9H8M9 152 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SDF2L1Q9HCN8 221 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SLC13A4Q9UKG4 626 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 INTS6Q9UL03 887 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 MKLN1Q9UL63 735 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ZNF711Q9Y462 761 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 PCDHAC2Q9Y5I4 1007 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 A6NLC8 198 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 BMPR1BO00238 502 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 IGLV2-11P01706 119 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 F7P08709 466 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 IRF1P10914 325 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ATP1A3P13637 1013 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HLA-DOBP13765 273 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 MAOAP21397 527 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 EPHA8P29322 1005 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 ICAM3P32942 547 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HARS2P49590 506 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 METAP2P50579 478 aaKnown RBP eCLIP2.29□□□□□ -2.04
CEP290-204ENST00000547926 NEXNQ0ZGT2 675 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 ZNF449Q6P9G9 518 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 UNQ6126/PRO20091Q6UXV3 157 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 MEX3BQ6ZN04 569 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 C9orf139Q6ZV77 190 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 NAGSQ8N159 534 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 NFKBIDQ8NI38 313 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 BBS10Q8TAM1 723 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SLC20A1Q8WUM9 679 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SECTM1Q8WVN6 248 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 SLC41A2Q96JW4 573 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 INPP4AQ96PE3 977 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 NR1H4Q96RI1 486 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 NODALQ96S42 347 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 PCYT2Q99447 389 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 CMKLR1Q99788 373 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 FAM110AQ9BQ89 295 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 C1QTNF5Q9BXJ0 243 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 NDST4Q9H3R1 872 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 EBF2Q9HAK2 575 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TCF7L2Q9NQB0 619 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HINT3Q9NQE9 182 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 SLC6A13Q9NSD5 602 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 C9orf78Q9NZ63 289 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 CEPT1Q9Y6K0 416 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 CAPN7Q9Y6W3 813 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 GREB1LQ9C091 1923 aaPredicted RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 CGNL1Q0VF96 1302 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CCDC196A0A1B0GTZ2 297 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 KRT36O76013 467 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 ITGA2P17301 1181 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 DGKAP23743 735 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CPOXP36551 454 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CTCFP49711 727 aaPredicted RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPH2P55795 449 aaKnown RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 SEC61BP60468 96 aaKnown RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 POU3F1Q03052 451 aaPredicted RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 RELQ04864 619 aaPredicted RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 ACAD10Q6JQN1 1059 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 RGMBQ6NW40 437 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 GFRALQ6UXV0 394 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CCNI2Q6ZMN8 369 aaPredicted RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 SLC9B2Q86UD5 537 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CIARTQ8N365 385 aaPredicted RBP2.28□□□□□ -2.04
CEP290-204ENST00000547926 HMGCLL1Q8TB92 370 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 CD101Q93033 1021 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 PPP1R13BQ96KQ4 1090 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 TTC14Q96N46 770 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 PIP5K1AQ99755 562 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 UBTD1Q9HAC8 227 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 BRF2Q9HAW0 419 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 ERVK-11Q9UQG0 969 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 VDAC3Q9Y277 283 aa2.28□□□□□ -2.04
CEP290-204ENST00000547926 KDM3AQ9Y4C1 1321 aa2.27□□□□□ -2.05
CEP290-204ENST00000547926 USP17L23D6RBM5 183 aa2.27□□□□□ -2.05
CEP290-204ENST00000547926 AMD1P17707 334 aa2.27□□□□□ -2.05
CEP290-204ENST00000547926 BDKRB2P30411 391 aa2.27□□□□□ -2.05
CEP290-204ENST00000547926 CORO1AP31146 461 aaKnown RBP2.27□□□□□ -2.05
CEP290-204ENST00000547926 HOXC13P31276 330 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms