RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RETREG1Q9H6L5 497 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 SARS2Q9NP81 518 aaKnown RBP9.43□□□□□ -0.9
YBX3-211ENST00000541351 EDARQ9UNE0 448 aa9.43□□□□□ -0.9
YBX3-211ENST00000541351 A0A1W2PQJ5 194 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 TEX33O43247 280 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 HSF2BPO75031 334 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 ZMPSTE24O75844 475 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 RASSF9O75901 435 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 ELFN1P0C7U0 828 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
YBX3-211ENST00000541351 KLK2P20151 261 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 NR2F2P24468 414 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 AK4P27144 223 aaPredicted RBP9.42□□□□□ -0.9
YBX3-211ENST00000541351 GKP32189 559 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 MAPK9P45984 424 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 IRAK1P51617 712 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 CASP6P55212 293 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 IRX6P78412 446 aaPredicted RBP9.42□□□□□ -0.9
YBX3-211ENST00000541351 ARF5P84085 180 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 CTBSQ01459 385 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 LTBQ06643 244 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 NME3Q13232 169 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 UGP2Q16851 508 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 ALFQ53S48 1182 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 CRB2Q5IJ48 1285 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 TMEM270Q6UE05 265 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 FAM180AQ6UWF9 173 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 Q6ZS92 163 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 BIVMQ86UB2 503 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 RAB43Q86YS6 212 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 SFRP1Q8N474 314 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 PAF1Q8N7H5 531 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 LRRN4CLQ8ND94 238 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 PATE1Q8WXA2 126 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 FER1L6-AS2Q96M78 137 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 SPOCK3Q9BQ16 436 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 TTYH3Q9C0H2 523 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 WDCPQ9H6R7 721 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 SUDS3Q9H7L9 328 aaPredicted RBP9.42□□□□□ -0.9
YBX3-211ENST00000541351 ASNSD1Q9NWL6 643 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 RARRES3Q9UL19 164 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 CSPG4Q6UVK1 2322 aa9.42□□□□□ -0.9
YBX3-211ENST00000541351 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 DRGXA6NNA5 263 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 RECQL5O94762 991 aaPredicted RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 ARCN1P48444 511 aaKnown RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 RPL34P49207 117 aaKnown RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 IL10RAQ13651 578 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 MEA1Q16626 185 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 IZUMO3Q5VZ72 239 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 B3GNTL1Q67FW5 361 aaPredicted RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 KCTD16Q68DU8 428 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 PNCKQ6P2M8 343 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 ZNF765Q7L2R6 523 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 PLA2G15Q8NCC3 412 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 SLC37A2Q8TED4 501 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 ELMO2Q96JJ3 720 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 C9orf72Q96LT7 481 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 TRAPPC9Q96Q05 1148 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 FOXC2Q99958 501 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 HERPUD2Q9BSE4 406 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 ZYG11BQ9C0D3 744 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 EXOC1Q9NV70 894 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 SUFUQ9UMX1 484 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 NEU2Q9Y3R4 380 aa9.41□□□□□ -0.9
YBX3-211ENST00000541351 MORC2Q9Y6X9 1032 aaPredicted RBP9.41□□□□□ -0.9
YBX3-211ENST00000541351 IGLV3-10A0A075B6K4 115 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 E2F3O00716 465 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 MED7O43513 233 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 CPNE3O75131 537 aaKnown RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 GABBR2O75899 941 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 C9P02748 559 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 IVLP07476 585 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 RAB40ALP0C0E4 278 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 MMP12P39900 470 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 ADCY8P40145 1251 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 TSFMP43897 325 aaKnown RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 GSDMDP57764 484 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 RPS18P62269 152 aaKnown RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 POLR2LP62875 67 aaKnown RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 RBPJQ06330 500 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 MYBPC3Q14896 1274 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 NFIL3Q16649 462 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 ZNF761Q86XN6 746 aaPredicted RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 LZTR1Q8N653 840 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 BCORP1Q8N888 145 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 GRHL3Q8TE85 626 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 MR1Q95460 341 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 DHX58Q96C10 678 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 CCDC120Q96HB5 630 aa9.4□□□□□ -0.9
YBX3-211ENST00000541351 ZNF641Q96N77 438 aaPredicted RBP9.4□□□□□ -0.9
YBX3-211ENST00000541351 OR2M4Q96R27 311 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms